Gm49211 Gene Detail

Summary

• Symbol
  Gm49211
• Name
  predicted gene, 49211

• Feature Type
  lncRNA gene
• IDs
  MGI:6118663
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr15:55867407-55909275 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  1165 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6118663	lncRNA gene	Chr15:55867407-55909275 (+)
129S1/SvImJ	ENSMUSG00200031314	lncRNA gene	Chr15:52845686-52847359 (+)
A/J	ENSMUSG00195006562	lncRNA gene	Chr15:52880901-52882574 (+)
AKR/J	ENSMUSG00220021585	lncRNA gene	Chr15:52881253-52882926 (+)
BALB/cJ	ENSMUSG00180009372	lncRNA gene	Chr15:52831657-52833330 (+)
C3H/HeJ	ENSMUSG00175004864	lncRNA gene	Chr15:53084662-53086335 (+)
C57BL/6NJ	ENSMUSG00215017572	lncRNA gene	Chr15:52825406-52827079 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005007228	lncRNA gene	Chr15:52709481-52711148 (+)
CBA/J	ENSMUSG00210007258	lncRNA gene	Chr15:52911865-52913538 (+)
DBA/2J	ENSMUSG00185028027	lncRNA gene	Chr15:52889382-52891055 (+)
FVB/NJ	ENSMUSG00205006796	lncRNA gene	Chr15:52736456-52738129 (+)
JF1/MsJ	ENSUMUG00000030480	lncRNA gene	Chr15:52724343-52726010 (+)
LP/J	ENSMUSG00230008905	lncRNA gene	Chr15:56204369-56206042 (+)
NOD/ShiLtJ	ENSMUSG00190017924	lncRNA gene	Chr15:52884918-52886591 (+)
NZO/HlLtJ	ENSMUSG00225028846	lncRNA gene	Chr15:56531381-56533054 (+)
PWK/PhJ	ENSLUMG00010028571	lncRNA gene	Chr15:52948463-52950130 (+)
SPRET/EiJ	ENSMSPG00010024448	lncRNA gene	Chr15:54069105-54070783 (+)
WSB/EiJ	ENSIUOG00005006500	lncRNA gene	Chr15:52884707-52886380 (+)

Homology

• Gene Tree
  Gm49211
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23

• Ensembl
  ENSMUSG00000115361 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000115361	Ensembl Gene Model | MGI Sequence Detail	41869	C57BL/6J
transcript	ENSMUST00000276891	Ensembl | MGI Sequence Detail	448	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;