Gm49194 Gene Detail

Summary

• Symbol
  Gm49194
• Name
  predicted gene, 49194

• Feature Type
  lncRNA gene
• IDs
  MGI:6118637
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr14:45510707-45512180 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  161 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6118637	lncRNA gene	Chr14:45510707-45512180 (+)
129S1/SvImJ	ENSMUSG00200016816	lncRNA gene	Chr14:34300525-34301998 (+)
A/J	ENSMUSG00195026107	lncRNA gene	Chr14:34529118-34530593 (+)
AKR/J	ENSMUSG00220043429	lncRNA gene	Chr14:33888742-33890211 (+)
BALB/cJ	ENSMUSG00180044983	lncRNA gene	Chr14:34132813-34134286 (+)
C3H/HeJ	ENSMUSG00175031339	lncRNA gene	Chr14:35818642-35820115 (+)
C57BL/6NJ	ENSMUSG00215040115	lncRNA gene	Chr14:34529769-34531244 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005011127	lncRNA gene	Chr14:36333958-36335416 (+)
CBA/J	ENSMUSG00210042734	lncRNA gene	Chr14:34463971-34465446 (+)
DBA/2J	ENSMUSG00185014951	lncRNA gene	Chr14:39252743-39254220 (+)
FVB/NJ	ENSMUSG00205049082	lncRNA gene	Chr14:33683876-33685351 (+)
JF1/MsJ	ENSUMUG00000049492	lncRNA gene	Chr14:51291397-51292872 (+)
LP/J	ENSMUSG00230021661	lncRNA gene	Chr14:51519457-51520922 (+)
NOD/ShiLtJ	ENSMUSG00190044406	lncRNA gene	Chr14:34156032-34157505 (+)
NZO/HlLtJ	ENSMUSG00225050793	lncRNA gene	Chr14:41747945-41749426 (+)
PWK/PhJ	ENSLUMG00010042335	lncRNA gene	Chr14:33760653-33762134 (+)
SPRET/EiJ	ENSMSPG00010003278	lncRNA gene	Chr14:37085067-37086440 (+)
WSB/EiJ	ENSIUOG00005040132	lncRNA gene	Chr14:33997810-33999289 (+)

Homology

• Gene Tree
  Gm49194
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000115373 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000115373	Ensembl Gene Model | MGI Sequence Detail	1474	C57BL/6J
transcript	ENSMUST00000227166	Ensembl | MGI Sequence Detail	1474	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;