Gm49190 Pseudogene Detail

Summary

• Symbol
  Gm49190
• Name
  predicted gene, 49190

• Feature Type
  pseudogene
• IDs
  MGI:6118631
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr14:47557867-47558513 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  86 from dbSNP Build 142
• Strain Annotations
  36

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6118631	pseudogene	Chr14:47557867-47558513 (-)
129S1/SvImJ	ENSMUSG00200012989	pseudogene	Chr4:21357374-21358012 (-)
129S1/SvImJ	ENSMUSG00200017055	pseudogene	Chr14:36380262-36380907 (-)
A/J	ENSMUSG00195011786	pseudogene	Chr14:79494860-79495506 (+)
A/J	ENSMUSG00195000339	pseudogene	Chr4:21831730-21832368 (-)
A/J	ENSMUSG00195024633	pseudogene	Chr14:36585928-36586573 (-)
AKR/J	ENSMUSG00220014830	pseudogene	Chr4:21581622-21582260 (-)
AKR/J	ENSMUSG00220008663	pseudogene	Chr14:78869206-78869852 (+)
AKR/J	ENSMUSG00220043788	pseudogene	Chr14:35960873-35961518 (-)
BALB/cJ	ENSMUSG00180010436	pseudogene	Chr14:78991576-78992222 (+)
BALB/cJ	ENSMUSG00180044446	pseudogene	Chr14:36194765-36195410 (-)
BALB/cJ	ENSMUSG00180000379	pseudogene	Chr4:21303804-21304442 (-)
C3H/HeJ	ENSMUSG00175002450	pseudogene	Chr4:21810869-21811507 (-)
C3H/HeJ	ENSMUSG00175029488	pseudogene	Chr14:37875225-37875870 (-)
C3H/HeJ	ENSMUSG00175009651	pseudogene	Chr14:80823377-80824023 (+)
C57BL/6NJ	ENSMUSG00215038785	pseudogene	Chr14:36578454-36579100 (-)
C57BL/6NJ	ENSMUSG00215001014	pseudogene	Chr4:21428224-21428862 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005010368	pseudogene	Chr14:38367160-38367806 (-)
CBA/J	ENSMUSG00210005193	pseudogene	Chr14:79532893-79533539 (+)
CBA/J	ENSMUSG00210005052	pseudogene	Chr4:21534986-21535624 (-)
CBA/J	ENSMUSG00210043112	pseudogene	Chr14:36520449-36521094 (-)
DBA/2J	ENSMUSG00185015596	pseudogene	Chr14:84655315-84655961 (+)
DBA/2J	ENSMUSG00185000473	pseudogene	Chr4:21626521-21627159 (-)
DBA/2J	ENSMUSG00185056093	pseudogene	Chr14:41309892-41310538 (-)
FVB/NJ	ENSMUSG00205000580	pseudogene	Chr4:21108844-21109482 (-)
FVB/NJ	ENSMUSG00205010692	pseudogene	Chr14:78647737-78648383 (+)
FVB/NJ	ENSMUSG00205048276	pseudogene	Chr14:35738001-35738646 (-)
JF1/MsJ	ENSUMUG00000055450	pseudogene	Chr14:53354208-53354854 (-)
LP/J	ENSMUSG00230053477	pseudogene	Chr14:53563181-53563827 (-)
NOD/ShiLtJ	ENSMUSG00190000683	pseudogene	Chr4:21527188-21527826 (-)
NOD/ShiLtJ	ENSMUSG00190046002	pseudogene	Chr14:36212002-36212647 (-)
NZO/HlLtJ	ENSMUSG00225050838	pseudogene	Chr14:43817275-43817921 (-)
PWK/PhJ	ENSLUMG00010044616	pseudogene	Chr14:35801481-35802127 (-)
SPRET/EiJ	ENSMSPG00010003662	pseudogene	Chr14:39128373-39129015 (-)
WSB/EiJ	ENSIUOG00005039160	pseudogene	Chr14:36085016-36085662 (-)
WSB/EiJ	ENSIUOG00005005509	pseudogene	Chr4:21264321-21264959 (-)

Homology

• Gene Tree
  Gm49190
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  38

• Ensembl
  ENSMUSG00000115728 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000115728	Ensembl Gene Model | MGI Sequence Detail	647	C57BL/6J
transcript	ENSMUST00000227470	Ensembl | MGI Sequence Detail	647	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;