Gm49057 Pseudogene Detail

Summary

• Symbol
  Gm49057
• Name
  predicted gene, 49057

• Feature Type
  pseudogene
• IDs
  MGI:6118435
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr14:84628750-84629019 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  39 from dbSNP Build 142
• Strain Annotations
  62

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6118435	pseudogene	Chr14:84628750-84629019 (+)
129S1/SvImJ	ENSMUSG00200032270	pseudogene	Chr12:48512774-48513043 (+)
A/J	ENSMUSG00195011690	pseudogene	Chr14:73295651-73295920 (+)
AKR/J	ENSMUSG00220008407	pseudogene	Chr14:72684879-72685148 (+)
BALB/cJ	ENSMUSG00180009823	pseudogene	Chr14:72798827-72799096 (+)
C3H/HeJ	ENSMUSG00175009436	pseudogene	Chr14:74620358-74620627 (+)
C57BL/6NJ	ENSMUSG00215004709	pseudogene	Chr14:72801360-72801629 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005053417	pseudogene	Chr7:97580070-97580339 (+)
CAST/EiJ	ENSTCUG00005014924	pseudogene	Chr10:27661892-27662161 (+)
CAST/EiJ	ENSTCUG00005030430	pseudogene	Chr11:24454192-24454461 (-)
CAST/EiJ	ENSTCUG00005053415	pseudogene	Chr7:95070018-95070286 (-)
CAST/EiJ	ENSTCUG00005012529	pseudogene	Chr12:53006239-53006508 (-)
CAST/EiJ	ENSTCUG00005002690	pseudogene	Chr15:14784213-14784482 (+)
CAST/EiJ	ENSTCUG00005002677	pseudogene	Chr15:18522005-18522274 (+)
CAST/EiJ	ENSTCUG00005015352	pseudogene	Chr15:28785492-28785762 (+)
CAST/EiJ	ENSTCUG00005013066	pseudogene	Chr16:42145565-42145834 (+)
CAST/EiJ	ENSTCUG00005014739	pseudogene	Chr16:59316558-59316824 (-)
CAST/EiJ	ENSTCUG00005019839	pseudogene	Chr17:54163560-54163850 (+)
CAST/EiJ	ENSTCUG00005045135	pseudogene	Chr19:8580568-8580837 (+)
CAST/EiJ	ENSTCUG00005011347	pseudogene	Chr2:137434345-137434615 (+)
CAST/EiJ	ENSTCUG00005002072	pseudogene	Chr3:76275496-76275764 (+)
CAST/EiJ	ENSTCUG00005031408	pseudogene	Chr3:137907224-137907493 (-)
CAST/EiJ	ENSTCUG00005039455	pseudogene	Chr4:49195192-49195461 (+)
CAST/EiJ	ENSTCUG00005008282	pseudogene	Chr6:75723434-75723703 (+)
CAST/EiJ	ENSTCUG00005029138	pseudogene	Chr6:22686948-22687217 (-)
CAST/EiJ	ENSTCUG00005039498	pseudogene	Chr5:85633144-85633413 (-)
CAST/EiJ	ENSTCUG00005026256	pseudogene	Chr5:26534283-26534552 (-)
CAST/EiJ	ENSTCUG00005008167	pseudogene	ChrX:109981585-109981854 (-)
CAST/EiJ	ENSTCUG00005034633	pseudogene	ChrX:26202071-26202340 (+)
CAST/EiJ	ENSTCUG00005030234	pseudogene	Chr10:31664962-31665231 (+)
CAST/EiJ	ENSTCUG00005011449	pseudogene	Chr15:37215259-37215528 (+)
CAST/EiJ	ENSTCUG00005027802	pseudogene	ChrX:17565502-17565771 (+)
CAST/EiJ	ENSTCUG00005005955	pseudogene	Chr8:37902079-37902348 (+)
CAST/EiJ	ENSTCUG00005025238	pseudogene	Chr8:23226165-23226434 (+)
CAST/EiJ	ENSTCUG00005022075	pseudogene	Chr8:3703821-3704090 (-)
CAST/EiJ	ENSTCUG00005002960	pseudogene	Chr7:134278800-134279069 (+)
CAST/EiJ	ENSTCUG00005021166	pseudogene	Chr1:159218055-159218324 (-)
CBA/J	ENSMUSG00210004773	pseudogene	Chr14:73307477-73307746 (+)
DBA/2J	ENSMUSG00185001591	pseudogene	Chr12:51561191-51561460 (+)
FVB/NJ	ENSMUSG00205015179	pseudogene	Chr12:49407037-49407306 (+)
JF1/MsJ	ENSUMUG00000052468	pseudogene	Chr14:39736946-39737214 (+)
JF1/MsJ	ENSUMUG00000051724	pseudogene	Chr11:8388407-8388676 (+)
JF1/MsJ	ENSUMUG00000001219	pseudogene	Chr5:59850073-59850338 (-)
JF1/MsJ	ENSUMUG00000055821	pseudogene	Chr7:46106253-46106522 (-)
JF1/MsJ	ENSUMUG00000026994	pseudogene	Chr1:17051002-17051271 (-)
JF1/MsJ	ENSUMUG00000010667	pseudogene	Chr8:31392328-31392597 (-)
JF1/MsJ	ENSUMUG00000013069	pseudogene	Chr14:118815832-118816099 (+)
JF1/MsJ	ENSUMUG00000047484	pseudogene	Chr6:63174694-63174963 (+)
JF1/MsJ	ENSUMUG00000056540	pseudogene	Chr10:77563731-77564000 (+)
JF1/MsJ	ENSUMUG00000025494	pseudogene	Chr15:45726231-45726500 (+)
JF1/MsJ	ENSUMUG00000025557	pseudogene	Chr15:48155503-48155772 (-)
JF1/MsJ	ENSUMUG00000011644	pseudogene	Chr3:4118526-4118795 (+)
JF1/MsJ	ENSUMUG00000004270	pseudogene	Chr3:120859441-120859710 (-)
JF1/MsJ	ENSUMUG00000039643	pseudogene	Chr18:53106381-53106650 (+)
JF1/MsJ	ENSUMUG00000016228	pseudogene	Chr16:76928855-76929124 (-)
JF1/MsJ	ENSUMUG00000032301	pseudogene	ChrX:56388857-56389126 (-)
JF1/MsJ	ENSUMUG00000051706	pseudogene	Chr11:7015689-7015958 (-)
JF1/MsJ	ENSUMUG00000013206	pseudogene	Chr14:113342748-113343017 (-)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190016832	pseudogene	Chr12:48609606-48609875 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010001947	pseudogene	Chr3:153237502-153237771 (+)
SPRET/EiJ	ENSMSPG00010000265	pseudogene	Chr14:76133771-76134040 (+)
WSB/EiJ	ENSIUOG00005011812	pseudogene	Chr1:13143255-13143524 (+)

Homology

• Gene Tree
  Gm49057
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  64

• Ensembl
  ENSMUSG00000115227 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000115227	Ensembl Gene Model | MGI Sequence Detail	270	C57BL/6J
transcript	ENSMUST00000227972	Ensembl | MGI Sequence Detail	270	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;