Gm49049 Pseudogene Detail

Summary

• Symbol
  Gm49049
• Name
  predicted gene, 49049

• Feature Type
  pseudogene
• IDs
  MGI:6118426
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr14:83007831-83008017 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  127 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6118426	pseudogene	Chr14:83007831-83008017 (+)
129S1/SvImJ	ENSMUSG00200010406	pseudogene	Chr14:71474593-71474779 (+)
A/J	ENSMUSG00195004053	pseudogene	Chr14:71674354-71674540 (+)
AKR/J	ENSMUSG00220007325	pseudogene	Chr14:70979804-70979990 (+)
BALB/cJ	ENSMUSG00180022894	pseudogene	Chr14:71173829-71174015 (+)
C3H/HeJ	ENSMUSG00175009484	pseudogene	Chr14:72988306-72988492 (+)
C57BL/6NJ	ENSMUSG00215023072	pseudogene	Chr14:71176405-71176591 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005002378	pseudogene	Chr14:72819988-72820174 (+)
CBA/J	ENSMUSG00210010371	pseudogene	Chr14:71602756-71602942 (+)
DBA/2J	ENSMUSG00185009304	pseudogene	Chr14:76770898-76771084 (+)
FVB/NJ	ENSMUSG00205026288	pseudogene	Chr14:70906448-70906634 (+)
JF1/MsJ	ENSUMUG00000019443	pseudogene	Chr14:87946910-87947096 (+)
LP/J	ENSMUSG00230002773	pseudogene	Chr14:88790370-88790556 (+)
NOD/ShiLtJ	ENSMUSG00190011483	pseudogene	Chr14:71451096-71451282 (+)
NZO/HlLtJ	ENSMUSG00225025272	pseudogene	Chr14:79039414-79039600 (+)
PWK/PhJ	ENSLUMG00010011091	pseudogene	Chr14:70774027-70774213 (+)
SPRET/EiJ	ENSMSPG00010000253	pseudogene	Chr14:74450539-74450719 (+)
WSB/EiJ	ENSIUOG00005024025	pseudogene	Chr14:70742084-70742270 (+)

Homology

• Gene Tree
  Gm49049
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000115051 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000115051	Ensembl Gene Model | MGI Sequence Detail	187	C57BL/6J
transcript	ENSMUST00000227503	Ensembl | MGI Sequence Detail	187	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;