Gm49043 Pseudogene Detail

Summary

• Symbol
  Gm49043
• Name
  predicted gene, 49043

• Feature Type
  pseudogene
• IDs
  MGI:6118418
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr14:80679845-80680310 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  92 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6118418	pseudogene	Chr14:80679845-80680310 (+)
129S1/SvImJ	ENSMUSG00200010567	pseudogene	Chr14:69127772-69128237 (+)
A/J	ENSMUSG00195004447	pseudogene	Chr14:69252568-69253033 (+)
AKR/J	ENSMUSG00220007387	pseudogene	Chr14:68633981-68634446 (+)
BALB/cJ	ENSMUSG00180022836	pseudogene	Chr14:68844170-68844635 (+)
C3H/HeJ	ENSMUSG00175031179	pseudogene	Chr14:70654107-70654572 (+)
C57BL/6NJ	ENSMUSG00215024464	pseudogene	Chr14:68846849-68847314 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005032279	pseudogene	Chr14:70475542-70475971 (+)
CBA/J	ENSMUSG00210010291	pseudogene	Chr14:69269990-69270455 (+)
DBA/2J	ENSMUSG00185009244	pseudogene	Chr14:74438016-74438481 (+)
FVB/NJ	ENSMUSG00205026772	pseudogene	Chr14:68672316-68672781 (+)
JF1/MsJ	ENSUMUG00000020098	pseudogene	Chr14:85584911-85585376 (+)
LP/J	ENSMUSG00230002853	pseudogene	Chr14:86460739-86461204 (+)
NOD/ShiLtJ	ENSMUSG00190010966	pseudogene	Chr14:69099843-69100308 (+)
NZO/HlLtJ	ENSMUSG00225025330	pseudogene	Chr14:76722777-76723242 (+)
PWK/PhJ	ENSLUMG00010011355	pseudogene	Chr14:68441219-68441684 (+)
SPRET/EiJ	ENSMSPG00010000233	pseudogene	Chr14:72066913-72067375 (+)
WSB/EiJ	ENSIUOG00005024200	pseudogene	Chr14:68441240-68441705 (+)

Homology

• Gene Tree
  Gm49043
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000115036 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000115036	Ensembl Gene Model | MGI Sequence Detail	466	C57BL/6J
transcript	ENSMUST00000227575	Ensembl | MGI Sequence Detail	466	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;