Gm49029 Pseudogene Detail

Summary

• Symbol
  Gm49029
• Name
  predicted gene, 49029

• Feature Type
  pseudogene
• IDs
  MGI:6118399
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr14:32924815-32925220 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  194 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6118399	pseudogene	Chr14:32924815-32925220 (+)
129S1/SvImJ	ENSMUSG00200038216	pseudogene	Chr14:24749700-24750104 (+)
A/J	ENSMUSG00195014192	pseudogene	Chr14:25825429-25825834 (+)
AKR/J	ENSMUSG00220036252	pseudogene	Chr14:24944154-24944559 (+)
BALB/cJ	ENSMUSG00180030712	pseudogene	Chr14:24913913-24914318 (+)
C3H/HeJ	ENSMUSG00175041203	pseudogene	Chr14:24981086-24981491 (+)
C57BL/6NJ	ENSMUSG00215035929	pseudogene	Chr14:25217769-25218173 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005025270	pseudogene	Chr14:25064590-25064995 (+)
CBA/J	ENSMUSG00210045756	pseudogene	Chr14:25228262-25228667 (+)
DBA/2J	ENSMUSG00185043536	pseudogene	Chr14:29501830-29502234 (+)
FVB/NJ	ENSMUSG00205036484	pseudogene	Chr14:25085789-25086194 (+)
JF1/MsJ	ENSUMUG00000052109	pseudogene	Chr14:36745671-36746075 (+)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190020316	pseudogene	Chr14:25237524-25237929 (+)
NZO/HlLtJ	ENSMUSG00225037347	pseudogene	Chr14:31112260-31112665 (+)
PWK/PhJ	ENSLUMG00010022863	pseudogene	Chr14:13347585-13347989 (+)
SPRET/EiJ	ENSMSPG00010044083	pseudogene	Chr14:26928498-26928916 (+)
WSB/EiJ	ENSIUOG00005013050	pseudogene	Chr14:25074388-25074793 (+)

Homology

• Gene Tree
  Gm49029
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000115104 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000115104	Ensembl Gene Model | MGI Sequence Detail	406	C57BL/6J
transcript	ENSMUST00000228565	Ensembl | MGI Sequence Detail	406	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;