Gm49024 Gene Detail

Summary

• Symbol
  Gm49024
• Name
  predicted gene, 49024

• Feature Type
  lncRNA gene
• IDs
  MGI:6118390
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr14:34383664-34384672 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  119 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6118390	lncRNA gene	Chr14:34383664-34384672 (+)
129S1/SvImJ	ENSMUSG00200038275	lncRNA gene	Chr14:26227103-26228103 (+)
A/J	ENSMUSG00195013997	lncRNA gene	Chr14:27284642-27285640 (+)
AKR/J	ENSMUSG00220035559	lncRNA gene	Chr14:26403415-26404412 (+)
BALB/cJ	ENSMUSG00180030452	lncRNA gene	Chr14:26373134-26374132 (+)
C3H/HeJ	ENSMUSG00175041972	lncRNA gene	Chr14:26440202-26441199 (+)
C57BL/6NJ	ENSMUSG00215035310	lncRNA gene	Chr14:26676936-26677934 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005024376	lncRNA gene	Chr14:26512466-26513471 (+)
CBA/J	ENSMUSG00210044242	lncRNA gene	Chr14:26687343-26688341 (+)
DBA/2J	ENSMUSG00185014570	lncRNA gene	Chr14:30959307-30960304 (+)
FVB/NJ	ENSMUSG00205039186	lncRNA gene	Chr14:26544937-26545935 (+)
JF1/MsJ	ENSUMUG00000049147	lncRNA gene	Chr14:38217518-38218518 (+)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190020476	lncRNA gene	Chr14:26691843-26692841 (+)
NZO/HlLtJ	ENSMUSG00225042030	lncRNA gene	Chr14:32571704-32572701 (+)
PWK/PhJ	ENSLUMG00010023232	lncRNA gene	Chr14:14803460-14804464 (+)
SPRET/EiJ	ENSMSPG00010043785	lncRNA gene	Chr14:28374589-28375611 (+)
WSB/EiJ	ENSIUOG00005012809	lncRNA gene	Chr14:26516204-26517201 (+)

Homology

• Gene Tree
  Gm49024
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22

• Ensembl
  ENSMUSG00000115575 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000115575	Ensembl Gene Model | MGI Sequence Detail	1009	C57BL/6J
transcript	ENSMUST00000227643	Ensembl | MGI Sequence Detail	998	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;