Gm49006 Pseudogene Detail

Summary

• Symbol
  Gm49006
• Name
  predicted gene, 49006

• Feature Type
  pseudogene
• IDs
  MGI:6118361
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr14:96912506-96912986 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  201 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6118361	pseudogene	Chr14:96912506-96912986 (+)
129S1/SvImJ	ENSMUSG00200019856	pseudogene	Chr14:85439919-85440399 (+)
A/J	ENSMUSG00195019862	pseudogene	Chr14:85613618-85614099 (+)
AKR/J	ENSMUSG00220002337	pseudogene	Chr14:85007457-85007938 (+)
BALB/cJ	ENSMUSG00180004510	pseudogene	Chr14:85096816-85097297 (+)
C3H/HeJ	ENSMUSG00175002791	pseudogene	Chr14:86962971-86963452 (+)
C57BL/6NJ	ENSMUSG00215017634	pseudogene	Chr14:85144742-85145222 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005016318	pseudogene	Chr14:86636840-86637320 (+)
CBA/J	ENSMUSG00210007888	pseudogene	Chr14:85644408-85644889 (+)
DBA/2J	ENSMUSG00185015582	pseudogene	Chr14:90826452-90826933 (+)
FVB/NJ	ENSMUSG00205014135	pseudogene	Chr14:84740899-84741380 (+)
JF1/MsJ	ENSUMUG00000013022	pseudogene	Chr14:101805467-101805947 (+)
LP/J	ENSMUSG00230005274	pseudogene	Chr14:102679474-102679954 (+)
NOD/ShiLtJ	ENSMUSG00190009595	pseudogene	Chr14:85433824-85434304 (+)
NZO/HlLtJ	ENSMUSG00225025216	pseudogene	Chr14:93087748-93088228 (+)
PWK/PhJ	ENSLUMG00010004647	pseudogene	Chr14:84661749-84662230 (+)
SPRET/EiJ	ENSMSPG00010009569	pseudogene	Chr14:88447360-88447840 (+)
WSB/EiJ	ENSIUOG00005018422	pseudogene	Chr14:84643771-84644251 (+)

Homology

• Gene Tree
  Gm49006
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000115535 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000115535	Ensembl Gene Model | MGI Sequence Detail	481	C57BL/6J
transcript	ENSMUST00000226638	Ensembl | MGI Sequence Detail	481	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;