Gm48944 Pseudogene Detail

Summary

• Symbol
  Gm48944
• Name
  predicted gene, 48944

• Feature Type
  pseudogene
• IDs
  MGI:6118266
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr14:92470941-92471210 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  50 from dbSNP Build 142
• Strain Annotations
  58

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6118266	pseudogene	Chr14:92470941-92471210 (+)
129S1/SvImJ	ENSMUSG00200013320	pseudogene	Chr14:80965809-80966078 (+)
A/J	ENSMUSG00195006668	pseudogene	Chr15:60268795-60269064 (+)
AKR/J	ENSMUSG00220001569	pseudogene	Chr3:74485930-74486199 (-)
AKR/J	ENSMUSG00220008857	pseudogene	Chr11:27472786-27473055 (+)
AKR/J	ENSMUSG00220030278	pseudogene	Chr10:32985833-32986102 (-)
AKR/J	ENSMUSG00220036428	pseudogene	ChrX:129751481-129751750 (-)
AKR/J	ENSMUSG00220044005	pseudogene	Chr12:111272320-111272589 (+)
AKR/J	ENSMUSG00220000393	pseudogene	Chr1:107284240-107284509 (+)
AKR/J	ENSMUSG00220018926	pseudogene	Chr4:64357583-64357852 (+)
AKR/J	ENSMUSG00220022373	pseudogene	Chr15:66982551-66982820 (-)
AKR/J	ENSMUSG00220038803	pseudogene	Chr4:36401540-36401809 (+)
AKR/J	ENSMUSG00220011357	pseudogene	Chr18:29966840-29967109 (-)
BALB/cJ	ENSMUSG00180023721	pseudogene	Chr18:30469472-30469741 (-)
BALB/cJ	ENSMUSG00180043508	pseudogene	Chr6:71343757-71344027 (-)
BALB/cJ	ENSMUSG00180000878	pseudogene	Chr4:63633421-63633690 (+)
BALB/cJ	ENSMUSG00180028579	pseudogene	Chr4:36167992-36168261 (+)
BALB/cJ	ENSMUSG00180002078	pseudogene	Chr3:74531300-74531569 (-)
BALB/cJ	ENSMUSG00180045954	pseudogene	Chr2:111772473-111772742 (+)
BALB/cJ	ENSMUSG00180010220	pseudogene	Chr15:60170598-60170867 (+)
BALB/cJ	ENSMUSG00180010796	pseudogene	Chr14:95596354-95596623 (-)
BALB/cJ	ENSMUSG00180026286	pseudogene	Chr14:3741090-3741359 (-)
BALB/cJ	ENSMUSG00180008323	pseudogene	Chr11:27285293-27285562 (+)
BALB/cJ	ENSMUSG00180000612	pseudogene	Chr1:107467156-107467425 (+)
C3H/HeJ	ENSMUSG00175024538	pseudogene	Chr4:36553765-36554034 (+)
C3H/HeJ	ENSMUSG00175027579	pseudogene	ChrX:137844190-137844459 (-)
C3H/HeJ	ENSMUSG00175002262	pseudogene	Chr12:115042357-115042626 (+)
C3H/HeJ	ENSMUSG00175005151	pseudogene	Chr15:60461981-60462250 (+)
C3H/HeJ	ENSMUSG00175014279	pseudogene	Chr14:97525331-97525600 (-)
C3H/HeJ	ENSMUSG00175030431	pseudogene	Chr12:71449843-71450111 (+)
C3H/HeJ	ENSMUSG00175050526	pseudogene	Chr3:90613412-90613681 (-)
C3H/HeJ	ENSMUSG00175012457	pseudogene	Chr6:106107877-106108147 (+)
C57BL/6NJ	ENSMUSG00215004788	pseudogene	Chr14:80688235-80688504 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005002418	pseudogene	Chr14:82222147-82222416 (+)
CAST/EiJ	ENSTCUG00005009157	pseudogene	Chr19:11633403-11633672 (-)
CBA/J	ENSMUSG00210012317	pseudogene	Chr12:112324947-112325216 (+)
CBA/J	ENSMUSG00210007426	pseudogene	Chr15:60293648-60293917 (+)
CBA/J	ENSMUSG00210032198	pseudogene	Chr12:67877283-67877551 (+)
CBA/J	ENSMUSG00210014360	pseudogene	Chr14:96176659-96176928 (-)
CBA/J	ENSMUSG00210047566	pseudogene	Chr6:71136586-71136856 (-)
CBA/J	ENSMUSG00210010237	pseudogene	Chr11:27247020-27247289 (+)
CBA/J	ENSMUSG00210040488	pseudogene	ChrX:135152565-135152834 (-)
CBA/J	ENSMUSG00210022283	pseudogene	Chr9:20788903-20789172 (-)
DBA/2J	ENSMUSG00185015463	pseudogene	Chr14:86398896-86399165 (+)
FVB/NJ	ENSMUSG00205037293	pseudogene	Chr9:65337262-65337531 (+)
FVB/NJ	ENSMUSG00205037804	pseudogene	Chr12:67506608-67506877 (+)
FVB/NJ	ENSMUSG00205007284	pseudogene	Chr15:59998573-59998842 (+)
FVB/NJ	ENSMUSG00205015180	pseudogene	Chr15:27143496-27143765 (-)
FVB/NJ	ENSMUSG00205010714	pseudogene	Chr10:26713774-26714043 (+)
FVB/NJ	ENSMUSG00205026955	pseudogene	Chr14:143239-143508 (+)
JF1/MsJ	ENSUMUG00000013648	pseudogene	Chr14:97361970-97362239 (+)
LP/J	ENSMUSG00230005246	pseudogene	Chr14:98237504-98237773 (+)
NOD/ShiLtJ	ENSMUSG00190018226	pseudogene	Chr15:60277121-60277390 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010002193	pseudogene	Chr14:80243408-80243677 (+)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005025600	pseudogene	Chr1:151397880-151398145 (-)
WSB/EiJ	ENSIUOG00005035667	pseudogene	Chr10:62342735-62343004 (+)
WSB/EiJ	ENSIUOG00005027251	pseudogene	Chr6:71705299-71705569 (-)
WSB/EiJ	ENSIUOG00005012352	pseudogene	Chr15:14729354-14729623 (+)

Homology

• Gene Tree
  Gm48944
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  60

• Ensembl
  ENSMUSG00000115308 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000115308	Ensembl Gene Model | MGI Sequence Detail	270	C57BL/6J
transcript	ENSMUST00000228682	Ensembl | MGI Sequence Detail	270	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;