Gm48925 Gene Detail

Summary

• Symbol
  Gm48925
• Name
  predicted gene, 48925

• Feature Type
  lncRNA gene
• IDs
  MGI:6118238
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr14:56173058-56175059 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  210 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6118238	lncRNA gene	Chr14:56173058-56175059 (-)
129S1/SvImJ	ENSMUSG00200043700	lncRNA gene	Chr14:44760807-44762796 (-)
A/J	ENSMUSG00195038786	lncRNA gene	Chr14:44977557-44979546 (-)
AKR/J	ENSMUSG00220037209	lncRNA gene	Chr14:44305433-44307422 (-)
BALB/cJ	ENSMUSG00180052948	lncRNA gene	Chr14:44601252-44603241 (-)
C3H/HeJ	ENSMUSG00175052546	lncRNA gene	Chr14:46283576-46285565 (-)
C57BL/6NJ	ENSMUSG00215049679	lncRNA gene	Chr14:44496331-44498320 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005050506	lncRNA gene	Chr14:46273906-46275906 (-)
CBA/J	ENSMUSG00210046606	lncRNA gene	Chr14:44964127-44966116 (-)
DBA/2J	ENSMUSG00185056388	lncRNA gene	Chr14:50158616-50160605 (+)
DBA/2J	ENSMUSG00185056185	lncRNA gene	Chr14:50030870-50032859 (-)
FVB/NJ	ENSMUSG00205046922	lncRNA gene	Chr14:44366996-44368985 (-)
JF1/MsJ	ENSUMUG00000050569	lncRNA gene	Chr14:61257416-61259415 (-)
LP/J	ENSMUSG00230053380	lncRNA gene	Chr14:62126650-62128639 (-)
NOD/ShiLtJ	ENSMUSG00190048935	lncRNA gene	Chr14:44730363-44732352 (-)
NZO/HlLtJ	ENSMUSG00225046898	lncRNA gene	Chr14:52417017-52419006 (-)
PWK/PhJ	ENSLUMG00010049515	lncRNA gene	Chr14:44186759-44188748 (-)
SPRET/EiJ	ENSMSPG00010048572	lncRNA gene	Chr14:47581566-47584278 (-)
WSB/EiJ	ENSIUOG00005044748	lncRNA gene	Chr14:44171385-44173371 (-)

Homology

• Gene Tree
  Gm48925
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000114978 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000114978	Ensembl Gene Model | MGI Sequence Detail	2002	C57BL/6J
transcript	ENSMUST00000227704	Ensembl | MGI Sequence Detail	409	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;