Gm48923 Gene Detail

Summary

• Symbol
  Gm48923
• Name
  predicted gene, 48923

• Feature Type
  lncRNA gene
• IDs
  MGI:6118234
  NCBI Gene: 115488479
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr15:51760493-51763191 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  266 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6118234	lncRNA gene	Chr15:51757875-51763626 (+)
129S1/SvImJ	ENSMUSG00200019411	lncRNA gene	Chr15:48755832-48758512 (+)
A/J	ENSMUSG00195005770	lncRNA gene	Chr15:48758782-48761462 (+)
AKR/J	ENSMUSG00220018108	lncRNA gene	Chr15:48758727-48761407 (+)
BALB/cJ	ENSMUSG00180004895	lncRNA gene	Chr15:48723990-48726670 (+)
C3H/HeJ	ENSMUSG00175020534	lncRNA gene	Chr15:48945450-48948130 (+)
C57BL/6NJ	ENSMUSG00215003262	lncRNA gene	Chr15:48718518-48721198 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005013993	lncRNA gene	Chr15:48618861-48622292 (+)
CBA/J	ENSMUSG00210026554	lncRNA gene	Chr15:48826551-48829231 (+)
DBA/2J	ENSMUSG00185013175	lncRNA gene	Chr15:48797807-48800487 (+)
FVB/NJ	ENSMUSG00205015324	lncRNA gene	Chr15:48614087-48616767 (+)
JF1/MsJ	ENSUMUG00000023130	lncRNA gene	Chr15:48622437-48625193 (+)
LP/J	ENSMUSG00230008608	lncRNA gene	Chr15:52116624-52119304 (+)
NOD/ShiLtJ	ENSMUSG00190008553	lncRNA gene	Chr15:48773215-48775895 (+)
NZO/HlLtJ	ENSMUSG00225028754	lncRNA gene	Chr15:52429883-52432563 (+)
PWK/PhJ	ENSLUMG00010012352	lncRNA gene	Chr15:48849968-48852730 (+)
SPRET/EiJ	ENSMSPG00010006968	lncRNA gene	Chr15:49827866-49831257 (+)
WSB/EiJ	ENSIUOG00005021903	lncRNA gene	Chr15:48789642-48793220 (+)

Homology

• Gene Tree
  Gm48923
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  28
• RefSeq
  1

• Ensembl
  ENSMUSG00000115616 (Evidence)
• NCBI Gene
  115488479

Representative Sequences			Length	Strain/Species
genomic	115488479	NCBI Gene Model | MGI Sequence Detail	2699	C57BL/6J
transcript	XR_003951503	RefSeq | MGI Sequence Detail	418	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;