Gm48850 Pseudogene Detail

Summary

• Symbol
  Gm48850
• Name
  predicted gene, 48850

• Feature Type
  pseudogene
• IDs
  MGI:6098587
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr9:17999341-17999652 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  42 from dbSNP Build 142
• Strain Annotations
  152

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6098587	pseudogene	Chr9:17999341-17999652 (+)
129S1/SvImJ	ENSMUSG00200028082	pseudogene	Chr7:120908010-120908321 (+)
129S1/SvImJ	ENSMUSG00200048393	pseudogene	Chr1:167095542-167095853 (+)
129S1/SvImJ	ENSMUSG00200033019	pseudogene	ChrX:61980617-61980928 (+)
129S1/SvImJ	ENSMUSG00200049495	pseudogene	Chr9:14865718-14866029 (+)
129S1/SvImJ	ENSMUSG00200013895	pseudogene	Chr10:125472351-125472658 (+)
129S1/SvImJ	ENSMUSG00200028743	pseudogene	Chr15:40047176-40047482 (-)
129S1/SvImJ	ENSMUSG00200050760	pseudogene	Chr4:107098479-107098790 (+)
129S1/SvImJ	ENSMUSG00200024643	pseudogene	Chr12:19488593-19488904 (+)
129S1/SvImJ	ENSMUSG00200013480	pseudogene	Chr7:52079654-52079965 (-)
129S1/SvImJ	ENSMUSG00200038932	pseudogene	Chr14:30146505-30146816 (+)
129S1/SvImJ	ENSMUSG00200050612	pseudogene	Chr9:15938567-15938878 (-)
129S1/SvImJ	ENSMUSG00200026300	pseudogene	Chr14:3903299-3903610 (-)
A/J	ENSMUSG00195014126	pseudogene	Chr7:55975007-55975318 (-)
A/J	ENSMUSG00195011793	pseudogene	Chr14:80625744-80626055 (+)
A/J	ENSMUSG00195002515	pseudogene	Chr18:27282307-27282618 (+)
A/J	ENSMUSG00195051850	pseudogene	Chr5:126320442-126320753 (+)
A/J	ENSMUSG00195039670	pseudogene	Chr9:14789296-14789607 (+)
A/J	ENSMUSG00195012904	pseudogene	Chr5:7580039-7580350 (-)
A/J	ENSMUSG00195004522	pseudogene	Chr14:68000788-68001099 (-)
A/J	ENSMUSG00195012931	pseudogene	Chr8:56038597-56038908 (-)
A/J	ENSMUSG00195012142	pseudogene	Chr3:71619046-71619357 (+)
A/J	ENSMUSG00195003054	pseudogene	Chr4:7815575-7815886 (-)
A/J	ENSMUSG00195000168	pseudogene	Chr1:21932623-21932934 (-)
A/J	ENSMUSG00195027431	pseudogene	Chr14:39848738-39849049 (+)
AKR/J	ENSMUSG00220005813	pseudogene	Chr16:63005018-63005329 (-)
AKR/J	ENSMUSG00220005819	pseudogene	Chr16:67716571-67716882 (+)
AKR/J	ENSMUSG00220043483	pseudogene	Chr1:54227622-54227933 (+)
AKR/J	ENSMUSG00220047490	pseudogene	Chr2:146153485-146153796 (+)
AKR/J	ENSMUSG00220003970	pseudogene	Chr1:139633904-139634215 (-)
AKR/J	ENSMUSG00220014361	pseudogene	Chr2:14298980-14299291 (+)
AKR/J	ENSMUSG00220022385	pseudogene	Chr15:61409257-61409568 (+)
AKR/J	ENSMUSG00220036457	pseudogene	Chr9:14765394-14765705 (+)
AKR/J	ENSMUSG00220015949	pseudogene	Chr12:54938264-54938575 (-)
AKR/J	ENSMUSG00220051440	pseudogene	Chr5:125795579-125795890 (+)
AKR/J	ENSMUSG00220035090	pseudogene	Chr1:169830349-169830660 (+)
BALB/cJ	ENSMUSG00180044209	pseudogene	Chr9:14917357-14917668 (+)
BALB/cJ	ENSMUSG00180005925	pseudogene	Chr8:27066435-27066746 (+)
BALB/cJ	ENSMUSG00180008863	pseudogene	Chr3:63648297-63648608 (-)
BALB/cJ	ENSMUSG00180024296	pseudogene	ChrX:17440011-17440322 (+)
BALB/cJ	ENSMUSG00180016950	pseudogene	Chr12:91010967-91011278 (+)
BALB/cJ	ENSMUSG00180008903	pseudogene	Chr13:33636436-33636747 (+)
BALB/cJ	ENSMUSG00180042336	pseudogene	Chr1:160590293-160590604 (-)
BALB/cJ	ENSMUSG00180048246	pseudogene	Chr14:39449154-39449465 (+)
BALB/cJ	ENSMUSG00180026593	pseudogene	Chr5:71132687-71132998 (+)
BALB/cJ	ENSMUSG00180024919	pseudogene	Chr14:70445528-70445839 (+)
C3H/HeJ	ENSMUSG00175021841	pseudogene	Chr4:48887276-48887587 (+)
C3H/HeJ	ENSMUSG00175028866	pseudogene	Chr5:13853063-13853374 (-)
C3H/HeJ	ENSMUSG00175018110	pseudogene	Chr4:5525681-5525990 (+)
C3H/HeJ	ENSMUSG00175045285	pseudogene	Chr19:39690364-39690675 (-)
C3H/HeJ	ENSMUSG00175004628	pseudogene	Chr18:15089406-15089717 (+)
C3H/HeJ	ENSMUSG00175004331	pseudogene	Chr5:73176523-73176834 (+)
C3H/HeJ	ENSMUSG00175010670	pseudogene	ChrX:149505237-149505548 (+)
C3H/HeJ	ENSMUSG00175036141	pseudogene	ChrX:115215590-115215901 (-)
C3H/HeJ	ENSMUSG00175042724	pseudogene	Chr6:52991835-52992146 (+)
C3H/HeJ	ENSMUSG00175042879	pseudogene	Chr9:14870946-14871257 (+)
C3H/HeJ	ENSMUSG00175032182	pseudogene	Chr14:70784098-70784409 (+)
C57BL/6NJ	ENSMUSG00215034875	pseudogene	Chr19:39754020-39754331 (-)
C57BL/6NJ	ENSMUSG00215037569	pseudogene	Chr14:30567775-30568086 (+)
C57BL/6NJ	ENSMUSG00215035966	pseudogene	Chr8:86417751-86418062 (+)
C57BL/6NJ	ENSMUSG00215039527	pseudogene	Chr9:14854960-14855271 (+)
C57BL/6NJ	ENSMUSG00215010618	pseudogene	Chr12:55252476-55252787 (-)
C57BL/6NJ	ENSMUSG00215008897	pseudogene	ChrX:43573444-43573755 (+)
C57BL/6NJ	ENSMUSG00215014022	pseudogene	Chr6:16042846-16043157 (+)
C57BL/6NJ	ENSMUSG00215011689	pseudogene	Chr8:4861522-4861833 (+)
C57BL/6NJ	ENSMUSG00215035216	pseudogene	Chr17:64207737-64208048 (+)
C57BL/6NJ	ENSMUSG00215013947	pseudogene	Chr8:20417756-20418067 (-)
C57BL/6NJ	ENSMUSG00215001935	pseudogene	Chr5:41023293-41023604 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005018272	pseudogene	Chr19:28486552-28486863 (-)
CBA/J	ENSMUSG00210054460	pseudogene	Chr11:70364245-70364556 (-)
CBA/J	ENSMUSG00210019833	pseudogene	Chr16:58170071-58170382 (+)
CBA/J	ENSMUSG00210045353	pseudogene	Chr9:14867494-14867805 (+)
CBA/J	ENSMUSG00210031473	pseudogene	Chr17:64357305-64357616 (+)
CBA/J	ENSMUSG00210021187	pseudogene	ChrX:110931361-110931669 (-)
CBA/J	ENSMUSG00210044475	pseudogene	Chr2:86554557-86554868 (+)
CBA/J	ENSMUSG00210009509	pseudogene	Chr10:125752405-125752712 (+)
CBA/J	ENSMUSG00210034959	pseudogene	Chr6:53029149-53029460 (+)
CBA/J	ENSMUSG00210013826	pseudogene	Chr12:741860-742171 (+)
CBA/J	ENSMUSG00210014534	pseudogene	Chr12:55512457-55512768 (-)
CBA/J	ENSMUSG00210054462	pseudogene	Chr11:68003106-68003417 (+)
DBA/2J	ENSMUSG00185049984	pseudogene	Chr7:9167223-9167534 (-)
DBA/2J	ENSMUSG00185050010	pseudogene	Chr7:9379471-9379782 (-)
DBA/2J	ENSMUSG00185027236	pseudogene	Chr9:14982776-14983087 (+)
DBA/2J	ENSMUSG00185046871	pseudogene	Chr9:106219164-106219475 (+)
DBA/2J	ENSMUSG00185054634	pseudogene	Chr10:80863766-80864077 (-)
DBA/2J	ENSMUSG00185045088	pseudogene	Chr10:89202588-89202899 (-)
DBA/2J	ENSMUSG00185009958	pseudogene	Chr10:121590261-121590572 (-)
DBA/2J	ENSMUSG00185036423	pseudogene	ChrX:58714703-58715014 (+)
DBA/2J	ENSMUSG00185006347	pseudogene	Chr8:44309309-44309620 (-)
DBA/2J	ENSMUSG00185040674	pseudogene	Chr5:25121606-25121917 (+)
DBA/2J	ENSMUSG00185004280	pseudogene	Chr1:18153551-18153862 (+)
DBA/2J	ENSMUSG00185050343	pseudogene	Chr6:120264752-120265063 (+)
FVB/NJ	ENSMUSG00205005415	pseudogene	Chr9:84397911-84398222 (+)
FVB/NJ	ENSMUSG00205015877	pseudogene	Chr2:16989794-16990105 (-)
FVB/NJ	ENSMUSG00205008641	pseudogene	Chr14:110520396-110520707 (+)
FVB/NJ	ENSMUSG00205009595	pseudogene	ChrX:41524245-41524554 (-)
FVB/NJ	ENSMUSG00205001577	pseudogene	Chr4:80061448-80061759 (-)
FVB/NJ	ENSMUSG00205052530	pseudogene	Chr13:18882600-18882911 (+)
FVB/NJ	ENSMUSG00205042691	pseudogene	Chr1:165614072-165614383 (+)
FVB/NJ	ENSMUSG00205047014	pseudogene	Chr2:157910607-157910918 (-)
FVB/NJ	ENSMUSG00205017692	pseudogene	Chr18:13754350-13754661 (-)
FVB/NJ	ENSMUSG00205009964	pseudogene	Chr3:62676030-62676341 (-)
FVB/NJ	ENSMUSG00205037139	pseudogene	Chr5:85194593-85194904 (+)
FVB/NJ	ENSMUSG00205018499	pseudogene	Chr1:13282466-13282777 (+)
JF1/MsJ	ENSUMUG00000033659	pseudogene	Chr14:44993704-44994015 (-)
LP/J	ENSMUSG00230027305	pseudogene	ChrX:168564644-168564955 (+)
LP/J	ENSMUSG00230029638	pseudogene	Chr17:54213550-54213861 (+)
LP/J	ENSMUSG00230004934	pseudogene	Chr9:3908813-3909124 (+)
LP/J	ENSMUSG00230044485	pseudogene	Chr9:15356173-15356484 (+)
LP/J	ENSMUSG00230007681	pseudogene	Chr7:53004857-53005168 (+)
LP/J	ENSMUSG00230038370	pseudogene	Chr14:40296954-40297265 (+)
LP/J	ENSMUSG00230003170	pseudogene	Chr5:43920023-43920334 (-)
LP/J	ENSMUSG00230027735	pseudogene	Chr1:164419273-164419584 (-)
LP/J	ENSMUSG00230000266	pseudogene	Chr3:3810607-3810918 (-)
LP/J	ENSMUSG00230017231	pseudogene	Chr12:54260646-54260957 (+)
LP/J	ENSMUSG00230018110	pseudogene	Chr13:43739861-43740172 (+)
LP/J	ENSMUSG00230005725	pseudogene	ChrX:115838352-115838663 (-)
NOD/ShiLtJ	ENSMUSG00190017633	pseudogene	Chr8:82016422-82016733 (-)
NOD/ShiLtJ	ENSMUSG00190042189	pseudogene	Chr9:14893586-14893897 (+)
NOD/ShiLtJ	ENSMUSG00190014960	pseudogene	ChrX:111556405-111556716 (-)
NOD/ShiLtJ	ENSMUSG00190030458	pseudogene	Chr18:45321167-45321478 (-)
NOD/ShiLtJ	ENSMUSG00190010199	pseudogene	Chr17:86144531-86144842 (-)
NOD/ShiLtJ	ENSMUSG00190025612	pseudogene	Chr11:102265172-102265483 (-)
NOD/ShiLtJ	ENSMUSG00190028672	pseudogene	Chr10:96980948-96981259 (-)
NOD/ShiLtJ	ENSMUSG00190002863	pseudogene	Chr1:43865868-43866179 (-)
NOD/ShiLtJ	ENSMUSG00190019189	pseudogene	Chr6:103570459-103570770 (-)
NOD/ShiLtJ	ENSMUSG00190007630	pseudogene	Chr7:53958650-53958961 (-)
NOD/ShiLtJ	ENSMUSG00190003112	pseudogene	Chr6:99358157-99358468 (-)
NZO/HlLtJ	ENSMUSG00225012099	pseudogene	Chr7:88961292-88961603 (+)
NZO/HlLtJ	ENSMUSG00225055130	pseudogene	Chr17:39017185-39017496 (-)
NZO/HlLtJ	ENSMUSG00225044125	pseudogene	Chr17:55235634-55235942 (-)
NZO/HlLtJ	ENSMUSG00225031798	pseudogene	Chr17:81417026-81417337 (-)
NZO/HlLtJ	ENSMUSG00225001963	pseudogene	Chr2:26624153-26624464 (-)
NZO/HlLtJ	ENSMUSG00225007519	pseudogene	Chr3:25887884-25888195 (-)
NZO/HlLtJ	ENSMUSG00225010403	pseudogene	Chr5:93990511-93990822 (-)
NZO/HlLtJ	ENSMUSG00225006483	pseudogene	Chr6:18970711-18971022 (+)
NZO/HlLtJ	ENSMUSG00225005948	pseudogene	Chr6:102090782-102091093 (+)
NZO/HlLtJ	ENSMUSG00225037362	pseudogene	ChrX:136210426-136210737 (-)
NZO/HlLtJ	ENSMUSG00225051255	pseudogene	Chr9:15252143-15252454 (+)
PWK/PhJ	no annotation
SPRET/EiJ	ENSMSPG00010024437	pseudogene	Chr9:15126040-15126309 (+)
WSB/EiJ	ENSIUOG00005045141	pseudogene	Chr9:14533923-14534234 (+)
WSB/EiJ	ENSIUOG00005005841	pseudogene	Chr8:4824424-4824735 (+)
WSB/EiJ	ENSIUOG00005006146	pseudogene	Chr7:44375253-44375564 (+)
WSB/EiJ	ENSIUOG00005053221	pseudogene	Chr7:6207370-6207681 (-)
WSB/EiJ	ENSIUOG00005004914	pseudogene	Chr4:44642344-44642655 (+)
WSB/EiJ	ENSIUOG00005043143	pseudogene	Chr12:112460068-112460379 (+)
WSB/EiJ	ENSIUOG00005030064	pseudogene	Chr2:121058661-121058972 (-)
WSB/EiJ	ENSIUOG00005053104	pseudogene	Chr2:20967588-20967899 (+)
WSB/EiJ	ENSIUOG00005028828	pseudogene	Chr18:8389486-8389797 (+)
WSB/EiJ	ENSIUOG00005043675	pseudogene	Chr10:51712046-51712357 (+)
WSB/EiJ	ENSIUOG00005009421	pseudogene	Chr10:125586549-125586856 (+)
WSB/EiJ	ENSIUOG00005009655	pseudogene	Chr3:55514253-55514564 (+)

Homology

• Gene Tree
  Gm48850
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  154

• Ensembl
  ENSMUSG00000111728 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000111728	Ensembl Gene Model | MGI Sequence Detail	312	C57BL/6J
transcript	ENSMUST00000216330	Ensembl | MGI Sequence Detail	312	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;