Gm48829 Gene Detail

Summary

• Symbol
  Gm48829
• Name
  predicted gene, 48829

• Feature Type
  lncRNA gene
• IDs
  MGI:6098551
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:18824427-18829519 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  78 from dbSNP Build 142
• Strain Annotations
  200

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6098551	lncRNA gene	Chr13:18824427-18829519 (-)
129S1/SvImJ	ENSMUSG00200014583	lncRNA gene	Chr13:16063153-16068245 (-)
A/J	ENSMUSG00195032137	lncRNA gene	Chr13:69982748-69986522 (-)
A/J	ENSMUSG00195001274	lncRNA gene	Chr3:3635488-3640568 (-)
A/J	ENSMUSG00195045243	lncRNA gene	Chr15:99619958-99625038 (+)
A/J	ENSMUSG00195044221	lncRNA gene	Chr11:53927761-53932841 (+)
A/J	ENSMUSG00195022374	lncRNA gene	Chr3:21309387-21314467 (+)
A/J	ENSMUSG00195035390	lncRNA gene	Chr6:56419178-56424257 (+)
A/J	ENSMUSG00195027467	lncRNA gene	Chr14:41214652-41219732 (+)
A/J	ENSMUSG00195009113	lncRNA gene	Chr4:51162281-51167362 (-)
A/J	ENSMUSG00195047332	lncRNA gene	Chr13:52254272-52259352 (-)
A/J	ENSMUSG00195009190	lncRNA gene	Chr4:101759867-101764947 (+)
A/J	ENSMUSG00195021483	lncRNA gene	Chr15:82122193-82127273 (-)
A/J	ENSMUSG00195017056	lncRNA gene	ChrX:38097967-38103047 (+)
A/J	ENSMUSG00195045339	lncRNA gene	Chr6:34977893-34982973 (+)
A/J	ENSMUSG00195011650	lncRNA gene	Chr8:4542256-4547336 (-)
A/J	ENSMUSG00195040158	lncRNA gene	Chr7:130136895-130141977 (-)
A/J	ENSMUSG00195013734	lncRNA gene	Chr13:1602240-1604829 (-)
A/J	ENSMUSG00195004091	lncRNA gene	Chr8:48068064-48073144 (+)
A/J	ENSMUSG00195016395	lncRNA gene	Chr1:139538620-139543700 (-)
A/J	ENSMUSG00195031879	lncRNA gene	Chr2:128839772-128844851 (-)
AKR/J	ENSMUSG00220021076	lncRNA gene	Chr9:85721441-85724030 (-)
AKR/J	ENSMUSG00220049158	lncRNA gene	Chr15:99589875-99594955 (+)
AKR/J	ENSMUSG00220048282	lncRNA gene	Chr15:27828068-27833187 (-)
AKR/J	ENSMUSG00220032505	lncRNA gene	Chr13:102156988-102162068 (+)
AKR/J	ENSMUSG00220053069	lncRNA gene	Chr11:100593981-100599061 (-)
AKR/J	ENSMUSG00220051119	lncRNA gene	Chr11:54087315-54092395 (+)
AKR/J	ENSMUSG00220018930	lncRNA gene	Chr4:68972888-68978008 (+)
AKR/J	ENSMUSG00220008868	lncRNA gene	Chr3:21303706-21308786 (+)
AKR/J	ENSMUSG00220009867	lncRNA gene	Chr5:24854275-24869217 (-)
AKR/J	ENSMUSG00220020467	lncRNA gene	Chr4:85583428-85588508 (-)
AKR/J	ENSMUSG00220044764	lncRNA gene	Chr7:73821948-73827067 (+)
AKR/J	ENSMUSG00220025041	lncRNA gene	Chr8:63623875-63628961 (-)
AKR/J	ENSMUSG00220017275	lncRNA gene	Chr3:3622843-3627923 (-)
AKR/J	ENSMUSG00220017817	lncRNA gene	Chr16:9750551-9753140 (+)
BALB/cJ	ENSMUSG00180001571	lncRNA gene	Chr13:70481053-70484827 (-)
BALB/cJ	ENSMUSG00180016169	lncRNA gene	Chr15:81998995-82004075 (-)
BALB/cJ	ENSMUSG00180018928	lncRNA gene	Chr13:52505540-52510620 (-)
BALB/cJ	ENSMUSG00180009088	lncRNA gene	Chr15:57851233-57856314 (-)
BALB/cJ	ENSMUSG00180051381	lncRNA gene	Chr11:54007287-54012367 (+)
BALB/cJ	ENSMUSG00180054212	lncRNA gene	Chr11:64893014-64895603 (-)
BALB/cJ	ENSMUSG00180010813	lncRNA gene	Chr6:56775554-56780633 (+)
BALB/cJ	ENSMUSG00180004262	lncRNA gene	Chr18:11856555-11861674 (+)
BALB/cJ	ENSMUSG00180007492	lncRNA gene	Chr3:3634168-3639248 (-)
BALB/cJ	ENSMUSG00180048145	lncRNA gene	Chr14:40843626-40848706 (+)
BALB/cJ	ENSMUSG00180023775	lncRNA gene	Chr18:35124377-35126966 (+)
BALB/cJ	ENSMUSG00180051389	lncRNA gene	Chr11:57517615-57522691 (-)
BALB/cJ	ENSMUSG00180050294	lncRNA gene	Chr2:128658290-128663369 (-)
BALB/cJ	ENSMUSG00180040173	lncRNA gene	Chr7:126834721-126839803 (-)
BALB/cJ	ENSMUSG00180046428	lncRNA gene	Chr15:99503107-99508187 (+)
BALB/cJ	ENSMUSG00180034234	lncRNA gene	ChrX:35812507-35817587 (+)
BALB/cJ	ENSMUSG00180048678	lncRNA gene	Chr6:35106350-35111430 (+)
BALB/cJ	ENSMUSG00180027573	lncRNA gene	Chr8:86726519-86731599 (-)
C3H/HeJ	ENSMUSG00175048815	lncRNA gene	Chr15:99821793-99826873 (+)
C3H/HeJ	ENSMUSG00175008422	lncRNA gene	Chr4:82047180-82052259 (-)
C3H/HeJ	ENSMUSG00175006963	lncRNA gene	Chr1:139765257-139770337 (-)
C3H/HeJ	ENSMUSG00175050373	lncRNA gene	Chr11:53962950-53968030 (+)
C3H/HeJ	ENSMUSG00175005155	lncRNA gene	Chr15:58124724-58129805 (-)
C3H/HeJ	ENSMUSG00175045507	lncRNA gene	Chr7:127563010-127568092 (-)
C3H/HeJ	ENSMUSG00175045121	lncRNA gene	ChrX:38837009-38842089 (+)
C3H/HeJ	ENSMUSG00175029383	lncRNA gene	Chr3:21302330-21307410 (+)
C3H/HeJ	ENSMUSG00175005217	lncRNA gene	Chr3:3646132-3651212 (-)
C57BL/6NJ	ENSMUSG00215033926	lncRNA gene	Chr13:15580774-15585866 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005007995	lncRNA gene	ChrX:103534960-103540040 (-)
CAST/EiJ	ENSTCUG00005007997	lncRNA gene	ChrX:105903943-105909024 (-)
CAST/EiJ	ENSTCUG00005043037	lncRNA gene	Chr19:95158-100238 (+)
CAST/EiJ	ENSTCUG00005015402	lncRNA gene	Chr19:57378348-57383428 (-)
CAST/EiJ	ENSTCUG00005033897	lncRNA gene	Chr2:80873717-80878797 (+)
CAST/EiJ	ENSTCUG00005010977	lncRNA gene	Chr12:22109570-22114691 (-)
CAST/EiJ	ENSTCUG00005033147	lncRNA gene	ChrX:29781541-29786621 (+)
CAST/EiJ	ENSTCUG00005052435	lncRNA gene	Chr17:36252830-36257910 (+)
CAST/EiJ	ENSTCUG00005037756	lncRNA gene	Chr12:68640192-68645272 (+)
CAST/EiJ	ENSTCUG00005014959	lncRNA gene	Chr15:21321459-21326538 (+)
CAST/EiJ	ENSTCUG00005021649	lncRNA gene	ChrX:96561369-96563958 (-)
CBA/J	ENSMUSG00210007789	lncRNA gene	Chr2:116853792-116858872 (-)
CBA/J	ENSMUSG00210044467	lncRNA gene	Chr7:77557754-77562873 (+)
CBA/J	ENSMUSG00210021979	lncRNA gene	Chr18:34663890-34668970 (+)
CBA/J	ENSMUSG00210022489	lncRNA gene	Chr17:82987428-82992508 (+)
CBA/J	ENSMUSG00210031540	lncRNA gene	Chr15:99572984-99578064 (+)
CBA/J	ENSMUSG00210033845	lncRNA gene	Chr15:97496183-97501263 (-)
CBA/J	ENSMUSG00210007138	lncRNA gene	Chr15:57950726-57955807 (-)
CBA/J	ENSMUSG00210024850	lncRNA gene	Chr15:28016784-28021903 (-)
CBA/J	ENSMUSG00210010632	lncRNA gene	Chr13:101931876-101936956 (+)
CBA/J	ENSMUSG00210012135	lncRNA gene	Chr13:90915941-90918530 (+)
CBA/J	ENSMUSG00210043176	lncRNA gene	Chr11:53814617-53819697 (+)
CBA/J	ENSMUSG00210019502	lncRNA gene	Chr1:182613812-182618931 (-)
CBA/J	ENSMUSG00210000735	lncRNA gene	Chr4:68751145-68756265 (+)
CBA/J	ENSMUSG00210014265	lncRNA gene	Chr1:139694156-139699236 (-)
CBA/J	ENSMUSG00210000220	lncRNA gene	Chr1:90889248-90891837 (-)
CBA/J	ENSMUSG00210016789	lncRNA gene	Chr4:81633903-81638982 (-)
CBA/J	ENSMUSG00210024675	lncRNA gene	Chr5:135186041-135188630 (+)
CBA/J	ENSMUSG00210038297	lncRNA gene	Chr3:21282406-21287486 (+)
CBA/J	ENSMUSG00210000995	lncRNA gene	Chr3:3630799-3635879 (-)
CBA/J	ENSMUSG00210035003	lncRNA gene	Chr6:58574383-58576969 (+)
CBA/J	ENSMUSG00210020858	lncRNA gene	Chr8:77251766-77256846 (+)
CBA/J	ENSMUSG00210040318	lncRNA gene	ChrX:36076282-36081362 (+)
CBA/J	ENSMUSG00210044568	lncRNA gene	Chr2:85063446-85066035 (+)
DBA/2J	ENSMUSG00185021670	lncRNA gene	Chr18:34598541-34603621 (+)
DBA/2J	ENSMUSG00185012167	lncRNA gene	Chr18:75739333-75741922 (-)
DBA/2J	ENSMUSG00185033442	lncRNA gene	ChrX:46780249-46785329 (+)
DBA/2J	ENSMUSG00185009755	lncRNA gene	Chr3:21525626-21530706 (+)
DBA/2J	ENSMUSG00185047557	lncRNA gene	Chr5:106820759-106825838 (+)
DBA/2J	ENSMUSG00185008925	lncRNA gene	Chr1:105879651-105884770 (+)
DBA/2J	ENSMUSG00185045047	lncRNA gene	Chr15:97540871-97545951 (-)
DBA/2J	ENSMUSG00185020748	lncRNA gene	Chr13:94576643-94579232 (+)
DBA/2J	ENSMUSG00185004505	lncRNA gene	Chr1:2330266-2335346 (+)
DBA/2J	ENSMUSG00185017505	lncRNA gene	Chr7:131599351-131604433 (-)
DBA/2J	ENSMUSG00185046731	lncRNA gene	Chr11:57542093-57547178 (-)
DBA/2J	ENSMUSG00185024550	lncRNA gene	Chr15:28002191-28007310 (-)
DBA/2J	ENSMUSG00185026970	lncRNA gene	Chr13:105693842-105698922 (+)
DBA/2J	ENSMUSG00185036143	lncRNA gene	Chr12:103260279-103265397 (-)
DBA/2J	ENSMUSG00185049944	lncRNA gene	Chr7:118003433-118008513 (+)
DBA/2J	ENSMUSG00185034746	lncRNA gene	Chr7:81887285-81892404 (+)
DBA/2J	ENSMUSG00185041684	lncRNA gene	Chr15:99589694-99594774 (+)
FVB/NJ	ENSMUSG00205031902	lncRNA gene	Chr4:117622680-117627799 (-)
FVB/NJ	ENSMUSG00205043909	lncRNA gene	Chr8:72489467-72492713 (+)
FVB/NJ	ENSMUSG00205043930	lncRNA gene	Chr8:72493538-72496784 (+)
FVB/NJ	ENSMUSG00205016919	lncRNA gene	Chr4:95233053-95238172 (-)
FVB/NJ	ENSMUSG00205035056	lncRNA gene	Chr1:145575066-145580146 (-)
FVB/NJ	ENSMUSG00205034467	lncRNA gene	ChrX:34423797-34428877 (+)
FVB/NJ	ENSMUSG00205001114	lncRNA gene	Chr4:67490263-67497832 (+)
FVB/NJ	ENSMUSG00205025877	lncRNA gene	Chr4:50253996-50259077 (-)
FVB/NJ	ENSMUSG00205047077	lncRNA gene	Chr7:127286252-127291334 (-)
FVB/NJ	ENSMUSG00205005293	lncRNA gene	Chr7:57339484-57342073 (-)
FVB/NJ	ENSMUSG00205044361	lncRNA gene	Chr6:65386219-65391329 (+)
FVB/NJ	ENSMUSG00205040645	lncRNA gene	Chr6:61694591-61699677 (+)
FVB/NJ	ENSMUSG00205033991	lncRNA gene	Chr6:58587941-58593057 (+)
FVB/NJ	ENSMUSG00205033827	lncRNA gene	Chr6:56636397-56641476 (+)
FVB/NJ	ENSMUSG00205002949	lncRNA gene	Chr8:46765201-46770281 (+)
FVB/NJ	ENSMUSG00205040577	lncRNA gene	Chr7:77506699-77511819 (+)
FVB/NJ	ENSMUSG00205048984	lncRNA gene	Chr15:97245330-97250410 (-)
FVB/NJ	ENSMUSG00205044814	lncRNA gene	Chr5:133997321-134002401 (+)
FVB/NJ	ENSMUSG00205016888	lncRNA gene	Chr4:100170565-100175645 (+)
FVB/NJ	ENSMUSG00205048073	lncRNA gene	Chr15:99294457-99299537 (+)
FVB/NJ	ENSMUSG00205039783	lncRNA gene	Chr15:81874759-81879839 (-)
FVB/NJ	ENSMUSG00205011345	lncRNA gene	Chr15:61743693-61748773 (-)
FVB/NJ	ENSMUSG00205015376	lncRNA gene	Chr15:27893438-27898557 (-)
FVB/NJ	ENSMUSG00205007280	lncRNA gene	Chr13:101369349-101374429 (+)
FVB/NJ	ENSMUSG00205009128	lncRNA gene	Chr13:90377845-90380434 (+)
FVB/NJ	ENSMUSG00205034458	lncRNA gene	Chr13:69462503-69466277 (-)
FVB/NJ	ENSMUSG00205030065	lncRNA gene	Chr13:2018875-2021464 (-)
FVB/NJ	ENSMUSG00205038887	lncRNA gene	Chr12:68569731-68574811 (-)
FVB/NJ	ENSMUSG00205001660	lncRNA gene	Chr12:37651914-37656991 (-)
FVB/NJ	ENSMUSG00205002852	lncRNA gene	Chr1:138943417-138948496 (-)
FVB/NJ	ENSMUSG00205004307	lncRNA gene	Chr10:101098864-101104016 (-)
FVB/NJ	ENSMUSG00205031634	lncRNA gene	Chr4:36211715-36216795 (-)
FVB/NJ	ENSMUSG00205002767	lncRNA gene	Chr3:20825857-20830937 (+)
FVB/NJ	ENSMUSG00205035010	lncRNA gene	Chr1:145442081-145444670 (+)
FVB/NJ	ENSMUSG00205045759	lncRNA gene	Chr2:127864069-127869148 (-)
FVB/NJ	ENSMUSG00205010973	lncRNA gene	Chr16:52760424-52765504 (-)
JF1/MsJ	ENSUMUG00000020907	lncRNA gene	Chr8:120184872-120189952 (-)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190040537	lncRNA gene	Chr1:182577608-182640308 (-)
NOD/ShiLtJ	ENSMUSG00190031224	lncRNA gene	Chr8:103187650-103192802 (+)
NOD/ShiLtJ	ENSMUSG00190033323	lncRNA gene	Chr8:77301039-77306119 (+)
NOD/ShiLtJ	ENSMUSG00190029545	lncRNA gene	Chr7:127428538-127433620 (-)
NOD/ShiLtJ	ENSMUSG00190009176	lncRNA gene	Chr6:58423910-58426496 (+)
NOD/ShiLtJ	ENSMUSG00190009173	lncRNA gene	Chr6:56417948-56423033 (+)
NOD/ShiLtJ	ENSMUSG00190043139	lncRNA gene	Chr4:50832898-50837979 (-)
NOD/ShiLtJ	ENSMUSG00190035607	lncRNA gene	Chr4:100607303-100612389 (+)
NOD/ShiLtJ	ENSMUSG00190047963	lncRNA gene	Chr2:116781991-116787071 (-)
NOD/ShiLtJ	ENSMUSG00190013953	lncRNA gene	Chr1:146268797-146271386 (-)
NOD/ShiLtJ	ENSMUSG00190047856	lncRNA gene	Chr5:134137051-134139640 (+)
NOD/ShiLtJ	ENSMUSG00190033587	lncRNA gene	Chr6:48054493-48059573 (-)
NOD/ShiLtJ	ENSMUSG00190017010	lncRNA gene	Chr15:57929869-57934950 (-)
NOD/ShiLtJ	ENSMUSG00190037442	lncRNA gene	Chr1:31743527-31748612 (+)
NOD/ShiLtJ	ENSMUSG00190024343	lncRNA gene	Chr18:34394719-34397308 (+)
NOD/ShiLtJ	ENSMUSG00190045387	lncRNA gene	Chr13:70096550-70100330 (-)
NOD/ShiLtJ	ENSMUSG00190052450	lncRNA gene	Chr11:54062954-54068034 (+)
NOD/ShiLtJ	ENSMUSG00190048486	lncRNA gene	Chr15:99534553-99539633 (+)
NOD/ShiLtJ	ENSMUSG00190045576	lncRNA gene	Chr9:19395031-19400109 (-)
NZO/HlLtJ	ENSMUSG00225032508	lncRNA gene	Chr13:19343760-19348852 (-)
PWK/PhJ	ENSLUMG00010004907	lncRNA gene	Chr14:89097182-89102318 (-)
PWK/PhJ	ENSLUMG00010016625	lncRNA gene	Chr1:174073167-174078248 (-)
PWK/PhJ	ENSLUMG00010001115	lncRNA gene	Chr14:96990456-96995542 (-)
PWK/PhJ	ENSLUMG00010041520	lncRNA gene	Chr7:112197083-112202163 (+)
PWK/PhJ	ENSLUMG00010001114	lncRNA gene	Chr14:98138702-98143781 (+)
PWK/PhJ	ENSLUMG00010021748	lncRNA gene	Chr15:26051144-26056229 (-)
PWK/PhJ	ENSLUMG00010007052	lncRNA gene	Chr4:33609415-33612004 (+)
PWK/PhJ	ENSLUMG00010007283	lncRNA gene	Chr18:78679881-78682466 (+)
PWK/PhJ	ENSLUMG00010033889	lncRNA gene	Chr17:82751948-82757058 (+)
PWK/PhJ	ENSLUMG00010053515	lncRNA gene	Chr17:29485267-29490346 (+)
PWK/PhJ	ENSLUMG00010022658	lncRNA gene	Chr9:47104868-47109954 (+)
PWK/PhJ	ENSLUMG00010039326	lncRNA gene	Chr14:40410321-40415401 (+)
SPRET/EiJ	ENSMSPG00010050328	lncRNA gene	Chr19:8973186-8978266 (+)
WSB/EiJ	ENSIUOG00005006297	lncRNA gene	Chr15:57986190-57991270 (-)
WSB/EiJ	ENSIUOG00005020585	lncRNA gene	Chr15:69674560-69679640 (+)
WSB/EiJ	ENSIUOG00005013704	lncRNA gene	Chr16:48763376-48768495 (-)
WSB/EiJ	ENSIUOG00005001341	lncRNA gene	Chr2:44348121-44353200 (+)
WSB/EiJ	ENSIUOG00005048924	lncRNA gene	Chr2:142754569-142759688 (+)
WSB/EiJ	ENSIUOG00005017673	lncRNA gene	Chr3:130958952-130964032 (-)
WSB/EiJ	ENSIUOG00005048812	lncRNA gene	Chr4:142000338-142002927 (-)
WSB/EiJ	ENSIUOG00005047407	lncRNA gene	Chr5:112057593-112060182 (-)
WSB/EiJ	ENSIUOG00005032291	lncRNA gene	Chr8:113369898-113375017 (-)
WSB/EiJ	ENSIUOG00005047053	lncRNA gene	ChrX:34345291-34350371 (-)
WSB/EiJ	ENSIUOG00005042433	lncRNA gene	ChrX:123399747-123404866 (+)
WSB/EiJ	ENSIUOG00005010316	lncRNA gene	Chr10:102155012-102160092 (-)
WSB/EiJ	ENSIUOG00005044400	lncRNA gene	Chr14:39580942-39586061 (-)
WSB/EiJ	ENSIUOG00005010906	lncRNA gene	Chr10:105100794-105105913 (-)
WSB/EiJ	ENSIUOG00005028607	lncRNA gene	Chr1:139093715-139098797 (-)
WSB/EiJ	ENSIUOG00005023013	lncRNA gene	Chr14:61498824-61503706 (+)

Homology

• Gene Tree
  Gm48829
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  202

• Ensembl
  ENSMUSG00000114118 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000114118	Ensembl Gene Model | MGI Sequence Detail	5093	C57BL/6J
transcript	ENSMUST00000221183	Ensembl | MGI Sequence Detail	2705	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;