Gm48765 Gene Detail

Summary

• Symbol
  Gm48765
• Name
  predicted gene, 48765

• Feature Type
  lncRNA gene
• IDs
  MGI:6098451
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:36190708-36373706 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  4431 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6098451	lncRNA gene	Chr13:36190708-36373706 (-)
129S1/SvImJ	ENSMUSG00200013164	lncRNA gene	Chr13:33393580-33576583 (-)
A/J	ENSMUSG00195034825	lncRNA gene	Chr13:32476437-32660046 (-)
AKR/J	ENSMUSG00220035335	lncRNA gene	Chr13:32271243-32454836 (-)
BALB/cJ	ENSMUSG00180008620	lncRNA gene	Chr13:32782097-32965710 (-)
C3H/HeJ	ENSMUSG00175015204	lncRNA gene	Chr13:32729294-32912890 (-)
C57BL/6NJ	ENSMUSG00215018620	lncRNA gene	Chr13:32915432-33098449 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005038356	lncRNA gene	Chr13:32988643-32990955 (-)
CBA/J	ENSMUSG00210012120	lncRNA gene	Chr13:32741833-32925431 (-)
DBA/2J	ENSMUSG00185034370	lncRNA gene	Chr13:33563783-33748518 (-)
FVB/NJ	ENSMUSG00205035712	lncRNA gene	Chr13:32442081-32628710 (-)
JF1/MsJ	ENSUMUG00000037827	lncRNA gene	Chr13:33349483-33351717 (-)
LP/J	ENSMUSG00230016697	lncRNA gene	Chr13:42885603-43069201 (-)
NOD/ShiLtJ	ENSMUSG00190013320	lncRNA gene	Chr13:32967222-33150193 (-)
NZO/HlLtJ	ENSMUSG00225035125	lncRNA gene	Chr13:36700298-36883306 (-)
PWK/PhJ	ENSLUMG00010032177	lncRNA gene	Chr13:32020338-32178929 (-)
SPRET/EiJ	ENSMSPG00010011358	lncRNA gene	Chr13:32130667-32132979 (+)
WSB/EiJ	ENSIUOG00005029524	lncRNA gene	Chr13:32120662-32303987 (-)

Homology

• Gene Tree
  Gm48765
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  4
• Gene trapped
  4
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000114407 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000114407	Ensembl Gene Model | MGI Sequence Detail	182999	C57BL/6J
transcript	ENSMUST00000223888	Ensembl | MGI Sequence Detail	2313	Not Applicable

References

• Summaries
  All 2

  Phenotypes 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
• Latest
  J:141210 Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI), Mouse Gene Trap Data Load from dbGSS. Database Download. 2008;