Gm48764 Gene Detail

Summary

• Symbol
  Gm48764
• Name
  predicted gene, 48764

• Feature Type
  lncRNA gene
• IDs
  MGI:6098449
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:9553584-9559637 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  114 from dbSNP Build 142
• Strain Annotations
  29

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6098449	lncRNA gene	Chr12:9553584-9559637 (-)
129S1/SvImJ	ENSMUSG00200024173	lncRNA gene	Chr12:6526038-6532091 (-)
129S1/SvImJ	ENSMUSG00200036843	lncRNA gene	Chr16:28658088-28661633 (-)
A/J	no annotation
AKR/J	ENSMUSG00220031322	lncRNA gene	Chr12:6603499-6609552 (-)
BALB/cJ	no annotation
C3H/HeJ	ENSMUSG00175009601	lncRNA gene	Chr12:6556300-6562353 (-)
C57BL/6NJ	ENSMUSG00215024358	lncRNA gene	Chr12:6390777-6396830 (-)
C57BL/6NJ	ENSMUSG00215028688	lncRNA gene	Chr16:28442830-28446375 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	ENSMUSG00210046854	lncRNA gene	Chr2:146036991-146040539 (+)
CBA/J	ENSMUSG00210013619	lncRNA gene	Chr12:6586924-6592977 (-)
DBA/2J	ENSMUSG00185006349	lncRNA gene	Chr8:44659920-44666012 (-)
DBA/2J	ENSMUSG00185021616	lncRNA gene	Chr12:6529780-6535833 (-)
FVB/NJ	ENSMUSG00205028423	lncRNA gene	Chr16:28540557-28544105 (-)
FVB/NJ	ENSMUSG00205003577	lncRNA gene	Chr12:6286411-6292464 (-)
JF1/MsJ	no annotation
LP/J	ENSMUSG00230018803	lncRNA gene	Chr7:87976874-87982960 (+)
LP/J	ENSMUSG00230000323	lncRNA gene	Chr1:105142581-105148667 (+)
LP/J	ENSMUSG00230012539	lncRNA gene	Chr12:8359629-8365682 (-)
LP/J	ENSMUSG00230009173	lncRNA gene	Chr16:55531107-55537154 (-)
LP/J	ENSMUSG00230007295	lncRNA gene	ChrX:24131984-24138070 (-)
LP/J	ENSMUSG00230019003	lncRNA gene	Chr4:85761243-85767290 (+)
LP/J	ENSMUSG00230047812	lncRNA gene	Chr12:91310992-91316668 (-)
LP/J	ENSMUSG00230027661	lncRNA gene	Chr1:165984460-165987999 (-)
LP/J	ENSMUSG00230013009	lncRNA gene	Chr16:8655960-8662006 (+)
NOD/ShiLtJ	ENSMUSG00190008375	lncRNA gene	Chr12:7773934-7779987 (-)
NZO/HlLtJ	ENSMUSG00225036515	lncRNA gene	Chr11:48157030-48163116 (-)
NZO/HlLtJ	ENSMUSG00225037442	lncRNA gene	Chr14:18700807-18704349 (+)
NZO/HlLtJ	ENSMUSG00225053679	lncRNA gene	Chr12:93083379-93089055 (-)
NZO/HlLtJ	ENSMUSG00225029934	lncRNA gene	Chr12:10438934-10444987 (-)
NZO/HlLtJ	ENSMUSG00225020386	lncRNA gene	Chr8:11042317-11045863 (-)
NZO/HlLtJ	ENSMUSG00225006044	lncRNA gene	Chr2:155365685-155369233 (+)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm48764
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  31

• Ensembl
  ENSMUSG00000112496 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000112496	Ensembl Gene Model | MGI Sequence Detail	6054	C57BL/6J
transcript	ENSMUST00000221043	Ensembl | MGI Sequence Detail	3666	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;