Gm48745 Gene Detail

Summary

• Symbol
  Gm48745
• Name
  predicted gene, 48745

• Feature Type
  lncRNA gene
• IDs
  MGI:6098416
  NCBI Gene: 115488186
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:95821653-95823317 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  205 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6098416	lncRNA gene	Chr13:95821582-95826132 (+)
129S1/SvImJ	ENSMUSG00200009231	unclassified gene	Chr13:90323918-90325607 (+)
A/J	ENSMUSG00195029542	unclassified gene	Chr13:90823417-90825106 (+)
AKR/J	ENSMUSG00220013981	unclassified gene	Chr13:89276528-89278192 (+)
BALB/cJ	ENSMUSG00180037661	unclassified gene	Chr13:91357236-91358900 (+)
C3H/HeJ	ENSMUSG00175018269	unclassified gene	Chr13:91520695-91522359 (+)
C57BL/6NJ	ENSMUSG00215034357	unclassified gene	Chr13:91422766-91424430 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005009914	unclassified gene	Chr13:90622405-90624158 (+)
CBA/J	ENSMUSG00210012098	unclassified gene	Chr13:90842673-90844337 (+)
DBA/2J	ENSMUSG00185020169	unclassified gene	Chr13:94503386-94505050 (+)
FVB/NJ	ENSMUSG00205008683	unclassified gene	Chr13:90304562-90306226 (+)
JF1/MsJ	ENSUMUG00000028065	unclassified gene	Chr13:94214324-94215988 (+)
LP/J	ENSMUSG00230037890	unclassified gene	Chr13:104521336-104523000 (+)
NOD/ShiLtJ	ENSMUSG00190044956	unclassified gene	Chr13:91203589-91205253 (+)
NZO/HlLtJ	ENSMUSG00225034145	unclassified gene	Chr13:97034685-97036349 (+)
PWK/PhJ	ENSLUMG00010011947	unclassified gene	Chr13:90308258-90309922 (+)
SPRET/EiJ	ENSMSPG00010010201	unclassified gene	Chr13:91572131-91573809 (+)
WSB/EiJ	ENSIUOG00005032385	unclassified gene	Chr13:90226232-90227896 (+)

Homology

• Gene Tree
  Gm48745
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Gene trapped
  1
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000113631 (Evidence)
• NCBI Gene
  115488186

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000113631	Ensembl Gene Model | MGI Sequence Detail	1665	C57BL/6J
transcript	AK155143	GenBank | ENA | DDBJ | MGI Sequence Detail	1666	NOD

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 5

  Phenotypes 1
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:141210 Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI), Mouse Gene Trap Data Load from dbGSS. Database Download. 2008;