Gm48743 Gene Detail

Summary

• Symbol
  Gm48743
• Name
  predicted gene, 48743

• Feature Type
  unclassified gene
• IDs
  MGI:6098412
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr10:8945163-8947219 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  211 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6098412	unclassified gene	Chr10:8945163-8947219 (-)
129S1/SvImJ	ENSMUSG00200010857	unclassified gene	Chr10:5936732-5938788 (-)
A/J	ENSMUSG00195010183	unclassified gene	Chr10:5832974-5835030 (-)
AKR/J	ENSMUSG00220007577	unclassified gene	Chr10:5956134-5958190 (-)
BALB/cJ	ENSMUSG00180025072	unclassified gene	Chr10:5994980-5997037 (-)
C3H/HeJ	ENSMUSG00175012808	unclassified gene	Chr10:5985767-5987823 (-)
C57BL/6NJ	ENSMUSG00215005349	unclassified gene	Chr10:5886945-5889001 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005018046	unclassified gene	Chr10:5941525-5943574 (-)
CBA/J	ENSMUSG00210012702	unclassified gene	Chr10:5931434-5933490 (-)
DBA/2J	ENSMUSG00185010350	unclassified gene	Chr10:5977965-5980021 (-)
FVB/NJ	ENSMUSG00205008524	unclassified gene	Chr10:5947705-5949761 (-)
JF1/MsJ	ENSUMUG00000037868	unclassified gene	Chr10:6041034-6043080 (-)
LP/J	ENSMUSG00230017786	unclassified gene	Chr10:7594829-7596885 (-)
NOD/ShiLtJ	ENSMUSG00190026254	unclassified gene	Chr10:5941631-5943687 (-)
NZO/HlLtJ	ENSMUSG00225017041	unclassified gene	Chr10:12124652-12126708 (-)
PWK/PhJ	ENSLUMG00010021300	unclassified gene	Chr10:5771618-5773673 (-)
SPRET/EiJ	ENSMSPG00010006812	unclassified gene	Chr10:6123685-6125787 (-)
WSB/EiJ	ENSIUOG00005013860	unclassified gene	Chr10:5869245-5871301 (-)

Homology

• Gene Tree
  Gm48743
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000111077 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000111077	Ensembl Gene Model | MGI Sequence Detail	2057	C57BL/6J

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm48743:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr96669	Chr10:8946894-8946898 (-)	323 bp