About   Help   FAQ
Gm48739 Pseudogene Detail
Summary
  • Symbol
    Gm48739
  • Name
    predicted gene, 48739
Location &
Maps
more
  • Sequence Map
    Chr9:41330347-41330778 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    186 from dbSNP Build 142
  • Strain Annotations
    16
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_6098405
 pseudogene Chr9:41330347-41330778 (+)
129S1/SvImJ ENSMUSG00200040992
 pseudogene Chr9:38407972-38408403 (+)
A/J ENSMUSG00195050219
 pseudogene Chr9:38164974-38165405 (+)
AKR/J ENSMUSG00220047900
 pseudogene Chr9:38246703-38247134 (+)
BALB/cJ ENSMUSG00180048226
 pseudogene Chr9:38288183-38288614 (+)
C3H/HeJ ENSMUSG00175050717
 pseudogene Chr9:38288678-38289109 (+)
C57BL/6NJ ENSMUSG00215036916
 pseudogene Chr9:38248238-38248669 (+)
CAROLI/EiJ no annotation
CAST/EiJ ENSTCUG00005045374
 pseudogene Chr9:38238399-38238830 (+)
CBA/J ENSMUSG00210048075
 pseudogene Chr9:38335454-38335885 (+)
DBA/2J ENSMUSG00185039836
 pseudogene Chr9:38384528-38384959 (+)
FVB/NJ ENSMUSG00205044274
 pseudogene Chr9:38653451-38653882 (+)
JF1/MsJ ENSUMUG00000047974
 pseudogene Chr9:38439173-38439604 (+)
LP/J no annotation
NOD/ShiLtJ ENSMUSG00190035170
 pseudogene Chr9:38476093-38476524 (+)
NZO/HlLtJ no annotation
PWK/PhJ ENSLUMG00010048885
 pseudogene Chr9:38399819-38400250 (+)
SPRET/EiJ ENSMSPG00010037588
 pseudogene Chr9:39137662-39138093 (+)
WSB/EiJ ENSIUOG00005045370
 pseudogene Chr9:37898693-37899124 (+)



Homology
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
less
  • All Sequences
    18
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000110885 Ensembl Gene Model | MGI Sequence Detail 432 C57BL/6J ±  kb
transcript ENSMUST00000216668 Ensembl | MGI Sequence Detail 432 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 1
  • Earliest
    J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
09/15/2026
MGI 6.29 		The Jackson Laboratory