Gm48705 Pseudogene Detail

Summary

• Symbol
  Gm48705
• Name
  predicted gene, 48705

• Feature Type
  pseudogene
• IDs
  MGI:6098346
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:67198799-67199089 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  104 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6098346	pseudogene	Chr13:67198799-67199089 (+)
129S1/SvImJ	ENSMUSG00200014107	pseudogene	Chr13:61996170-61996481 (+)
A/J	ENSMUSG00195030259	pseudogene	Chr13:62254979-62255290 (+)
AKR/J	ENSMUSG00220039085	pseudogene	Chr13:61231826-61232137 (+)
BALB/cJ	ENSMUSG00180026894	pseudogene	Chr13:62734380-62734691 (+)
C3H/HeJ	ENSMUSG00175008980	pseudogene	Chr13:63045752-63046063 (+)
C57BL/6NJ	ENSMUSG00215012391	pseudogene	Chr13:62724859-62725149 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005012167	pseudogene	Chr13:62746423-62746713 (+)
CBA/J	ENSMUSG00210009411	pseudogene	Chr13:62368122-62368433 (+)
DBA/2J	ENSMUSG00185008867	pseudogene	Chr13:66063717-66064028 (+)
FVB/NJ	ENSMUSG00205025483	pseudogene	Chr13:61788173-61788484 (+)
JF1/MsJ	ENSUMUG00000039583	pseudogene	Chr13:65718740-65719030 (+)
LP/J	ENSMUSG00230034523	pseudogene	Chr13:76177408-76177719 (+)
NOD/ShiLtJ	ENSMUSG00190040838	pseudogene	Chr13:62350429-62350740 (+)
NZO/HlLtJ	ENSMUSG00225047937	pseudogene	Chr13:68475000-68475311 (+)
PWK/PhJ	ENSLUMG00010011941	pseudogene	Chr13:61856716-61857027 (+)
SPRET/EiJ	ENSMSPG00010031417	pseudogene	Chr13:62646921-62647211 (+)
WSB/EiJ	ENSIUOG00005022618	pseudogene	Chr13:61535369-61535680 (+)

Homology

• Gene Tree
  Gm48705
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000114834 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000114834	Ensembl Gene Model | MGI Sequence Detail	291	C57BL/6J
transcript	ENSMUST00000223867	Ensembl | MGI Sequence Detail	291	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;