Gm48691 Pseudogene Detail

Summary

• Symbol
  Gm48691
• Name
  predicted gene, 48691

• Feature Type
  pseudogene
  BioType Conflict
  
• IDs
  MGI:6098320
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:62550307-62555692 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  189 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6098320	pseudogene	Chr13:62549874-62564890 (-)
129S1/SvImJ	no annotation
A/J	ENSMUSG00195044713	pseudogene	Chr13:58836163-58850704 (-)
AKR/J	no annotation
BALB/cJ	ENSMUSG00180017344	pseudogene	Chr13:59171159-59185709 (-)
BALB/cJ	ENSMUSG00180019048	pseudogene	Chr13:58534108-58661656 (+)
C3H/HeJ	ENSMUSG00175046258	pseudogene	Chr13:58958080-58972632 (-)
C57BL/6NJ	ENSMUSG00215040811	pseudogene	Chr13:58960498-58975049 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	ENSMUSG00210042344	pseudogene	Chr13:59157592-59172142 (-)
DBA/2J	ENSMUSG00185017596	pseudogene	Chr13:60006190-60020740 (-)
FVB/NJ	ENSMUSG00205047050	pseudogene	Chr13:58159734-58174288 (-)
JF1/MsJ	ENSUMUG00000036548	pseudogene	Chr13:59436306-59451240 (+)
JF1/MsJ	ENSUMUG00000043417	pseudogene	Chr13:58780472-58828690 (+)
LP/J	ENSMUSG00230036470	pseudogene	Chr13:69358395-69372949 (-)
NOD/ShiLtJ	ENSMUSG00190041130	pseudogene	Chr13:58420105-58425828 (+)
NOD/ShiLtJ	ENSMUSG00190033608	pseudogene	Chr13:58921404-58935513 (-)
NZO/HlLtJ	ENSMUSG00225047917	pseudogene	Chr13:63057470-63072020 (-)
PWK/PhJ	ENSLUMG00010025644	pseudogene	Chr13:57663353-57669275 (+)
PWK/PhJ	ENSLUMG00010024190	pseudogene	Chr13:58267551-58290967 (+)
PWK/PhJ	ENSLUMG00010025662	pseudogene	Chr13:57761551-57767278 (+)
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Expression

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  26

• Ensembl
  ENSMUSG00000113623 (Evidence), ENSMUSG00000121822 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000113623	Ensembl Gene Model | MGI Sequence Detail	5386	C57BL/6J
transcript	ENSMUST00000221652	Ensembl | MGI Sequence Detail	1515	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;