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Gm48646 Gene Detail
Summary
  • Symbol
    Gm48646
  • Name
    predicted gene, 48646
Location &
Maps
more
  • Sequence Map
    Chr9:22281848-22283075 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    109 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_6098253
 lncRNA gene Chr9:22281848-22283075 (-)
129S1/SvImJ ENSMUSG00200049998
 lncRNA gene Chr9:19236936-19238163 (-)
A/J ENSMUSG00195039848
 lncRNA gene Chr9:19073617-19074844 (-)
AKR/J ENSMUSG00220036070
 lncRNA gene Chr9:19076031-19077258 (-)
BALB/cJ ENSMUSG00180043275
 lncRNA gene Chr9:19207893-19209120 (-)
C3H/HeJ ENSMUSG00175045259
 lncRNA gene Chr9:19170397-19171624 (-)
C57BL/6NJ ENSMUSG00215038788
 lncRNA gene Chr9:19167702-19168929 (-)
CAROLI/EiJ no annotation
CAST/EiJ ENSTCUG00005034968
 lncRNA gene Chr9:19217968-19219195 (-)
CBA/J ENSMUSG00210045232
 lncRNA gene Chr9:19151310-19152537 (-)
DBA/2J ENSMUSG00185027524
 lncRNA gene Chr9:19266626-19267853 (-)
FVB/NJ ENSMUSG00205045603
 lncRNA gene Chr9:19513820-19515047 (-)
JF1/MsJ ENSUMUG00000050054
 lncRNA gene Chr9:19398807-19400034 (-)
LP/J ENSMUSG00230044705
 lncRNA gene Chr9:19672923-19674150 (-)
NOD/ShiLtJ ENSMUSG00190044791
 lncRNA gene Chr9:19206709-19207936 (-)
NZO/HlLtJ ENSMUSG00225051293
 lncRNA gene Chr9:19608548-19609775 (-)
PWK/PhJ ENSLUMG00010048247
 lncRNA gene Chr9:19276331-19277558 (-)
SPRET/EiJ ENSMSPG00010025334
 lncRNA gene Chr9:19496154-19497381 (-)
WSB/EiJ ENSIUOG00005047477
 lncRNA gene Chr9:18735172-18736399 (-)



Homology
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
less
  • All Sequences
    20
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000111069 Ensembl Gene Model | MGI Sequence Detail 1228 C57BL/6J ±  kb
transcript ENSMUST00000214468 Ensembl | MGI Sequence Detail 1228 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 1
  • Earliest
    J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/15/2026
MGI 6.29 		The Jackson Laboratory