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Gm48640 Pseudogene Detail
Summary
  • Symbol
    Gm48640
  • Name
    predicted gene, 48640
Location &
Maps
more
  • Sequence Map
    Chr9:5952442-5952667 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    147 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_6098247
 pseudogene Chr9:5952442-5952667 (-)
129S1/SvImJ ENSMUSG00200023047
 pseudogene Chr9:2814488-2814713 (-)
A/J ENSMUSG00195019744
 pseudogene Chr9:2714785-2715010 (-)
AKR/J ENSMUSG00220018938
 pseudogene Chr9:2880919-2881144 (-)
BALB/cJ ENSMUSG00180011872
 pseudogene Chr9:2852764-2852989 (-)
C3H/HeJ ENSMUSG00175024237
 pseudogene Chr9:2780184-2780409 (-)
C57BL/6NJ ENSMUSG00215007378
 pseudogene Chr9:2788636-2788861 (-)
CAROLI/EiJ no annotation
CAST/EiJ ENSTCUG00005007345
 pseudogene Chr9:2885621-2885846 (-)
CBA/J ENSMUSG00210011019
 pseudogene Chr9:2802277-2802497 (-)
DBA/2J ENSMUSG00185005272
 pseudogene Chr9:2920860-2921085 (-)
FVB/NJ ENSMUSG00205007189
 pseudogene Chr9:2910532-2910757 (-)
JF1/MsJ no annotation
LP/J ENSMUSG00230004702
 pseudogene Chr9:3380632-3380857 (-)
NOD/ShiLtJ ENSMUSG00190022381
 pseudogene Chr9:2811530-2811755 (-)
NZO/HlLtJ ENSMUSG00225017475
 pseudogene Chr9:3260467-3260692 (-)
PWK/PhJ ENSLUMG00010006471
 pseudogene Chr9:2920507-2920732 (-)
SPRET/EiJ ENSMSPG00010005586
 pseudogene Chr9:2972433-2972658 (-)
WSB/EiJ ENSIUOG00005007837
 pseudogene Chr9:2725525-2725750 (-)



Homology
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
less
  • All Sequences
    19
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000110932 Ensembl Gene Model | MGI Sequence Detail 226 C57BL/6J ±  kb
transcript ENSMUST00000216024 Ensembl | MGI Sequence Detail 226 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 1
  • Earliest
    J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/15/2026
MGI 6.29 		The Jackson Laboratory