Gm48630 Gene Detail

Summary

• Symbol
  Gm48630
• Name
  predicted gene, 48630

• Feature Type
  unclassified gene
• IDs
  MGI:6098232
• Alliance
  genome feature page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr12:110951808-110953576 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  165 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6098232	unclassified gene	Chr12:110951808-110953576 (-)
129S1/SvImJ	ENSMUSG00200027605	unclassified gene	Chr12:102728193-102729961 (-)
A/J	ENSMUSG00195047216	unclassified gene	Chr12:105251289-105253057 (-)
AKR/J	ENSMUSG00220036571	unclassified gene	Chr12:103144847-103146625 (-)
BALB/cJ	ENSMUSG00180049887	unclassified gene	Chr12:104491280-104493048 (-)
C3H/HeJ	ENSMUSG00175048893	unclassified gene	Chr12:107062824-107064592 (-)
C57BL/6NJ	ENSMUSG00215047761	unclassified gene	Chr12:103764136-103765904 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005041967	unclassified gene	Chr12:103231897-103233663 (-)
CBA/J	ENSMUSG00210031784	unclassified gene	Chr12:104124295-104126065 (-)
DBA/2J	ENSMUSG00185029776	unclassified gene	Chr12:105954262-105956032 (-)
FVB/NJ	ENSMUSG00205048049	unclassified gene	Chr12:103176066-103177834 (-)
JF1/MsJ	ENSUMUG00000027242	unclassified gene	Chr12:110713909-110715677 (-)
LP/J	ENSMUSG00230044727	unclassified gene	Chr12:112992803-112994571 (-)
NOD/ShiLtJ	ENSMUSG00190032432	unclassified gene	Chr12:82053487-82055265 (+)
NZO/HlLtJ	ENSMUSG00225043139	unclassified gene	Chr12:114740989-114742757 (-)
PWK/PhJ	ENSLUMG00010051591	unclassified gene	Chr12:104170290-104172066 (-)
SPRET/EiJ	ENSMSPG00010026085	unclassified gene	Chr12:106456959-106458735 (-)
WSB/EiJ	ENSIUOG00005037147	unclassified gene	Chr12:103161629-103163397 (-)

Homology

• Gene Tree
  Gm48630
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000113682 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000113682	Ensembl Gene Model | MGI Sequence Detail	1769	C57BL/6J

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm48630:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr117808	Chr12:110953564-110953579 (-)	4 bp
Tssr117807	Chr12:110953538-110953544 (-)	35 bp