Gm48598 Pseudogene Detail

Summary

• Symbol
  Gm48598
• Name
  predicted gene, 48598

• Feature Type
  pseudogene
• IDs
  MGI:6098176
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr7:8851145-8853614 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  6 from dbSNP Build 142
• Strain Annotations
  28

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6098176	pseudogene	Chr7:8851145-8853614 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	ENSMUSG00215044661	pseudogene	Chr7:4303237-4303417 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	ENSMUSG00185048709	pseudogene	Chr7:5724279-5726749 (-)
DBA/2J	ENSMUSG00185048700	pseudogene	Chr7:4954320-4956786 (-)
DBA/2J	ENSMUSG00185048867	pseudogene	Chr7:4235838-4238306 (-)
FVB/NJ	ENSMUSG00205048231	pseudogene	Chr7:3832326-3834791 (-)
JF1/MsJ	ENSUMUG00000055700	pseudogene	Chr7:6455258-6457730 (-)
JF1/MsJ	ENSUMUG00000055655	pseudogene	Chr7:5499837-5502313 (-)
JF1/MsJ	ENSUMUG00000054323	pseudogene	Chr7:5828307-5830774 (-)
LP/J	ENSMUSG00230041982	pseudogene	Chr7:9739575-9742041 (-)
LP/J	ENSMUSG00230041975	pseudogene	Chr7:9386954-9389421 (-)
LP/J	ENSMUSG00230041312	pseudogene	Chr7:8646678-8649147 (-)
LP/J	ENSMUSG00230041877	pseudogene	Chr7:7213259-7215731 (-)
LP/J	ENSMUSG00230048931	pseudogene	Chr7:10069985-10072459 (-)
LP/J	ENSMUSG00230048941	pseudogene	Chr7:10374471-10376943 (-)
LP/J	ENSMUSG00230048952	pseudogene	Chr7:10593396-10595863 (-)
LP/J	ENSMUSG00230041901	pseudogene	Chr7:7907889-7910357 (-)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	ENSMUSG00225022812	pseudogene	Chr7:8218559-8221032 (-)
NZO/HlLtJ	ENSMUSG00225022823	pseudogene	Chr7:8437488-8439955 (-)
NZO/HlLtJ	ENSMUSG00225022777	pseudogene	Chr7:7583680-7586146 (-)
NZO/HlLtJ	ENSMUSG00225022767	pseudogene	Chr7:7231070-7233538 (-)
NZO/HlLtJ	ENSMUSG00225022801	pseudogene	Chr7:7914063-7916537 (-)
NZO/HlLtJ	ENSMUSG00225022727	pseudogene	Chr7:5056868-5059340 (-)
NZO/HlLtJ	ENSMUSG00225022225	pseudogene	Chr7:6490293-6492762 (-)
NZO/HlLtJ	ENSMUSG00225022753	pseudogene	Chr7:5751485-5753953 (-)
PWK/PhJ	ENSLUMG00010051789	pseudogene	Chr7:7772445-7774912 (-)
SPRET/EiJ	ENSMSPG00010050423	pseudogene	Chr7:4026005-4028474 (+)
WSB/EiJ	ENSIUOG00005053178	pseudogene	Chr7:3945181-3945361 (-)

Homology

• Gene Tree
  Gm48598
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  30

• Ensembl
  ENSMUSG00000110977 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000110977	Ensembl Gene Model | MGI Sequence Detail	2470	C57BL/6J
transcript	ENSMUST00000216651	Ensembl | MGI Sequence Detail	300	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;