Gm48568 Pseudogene Detail

Summary

• Symbol
  Gm48568
• Name
  predicted gene, 48568

• Feature Type
  pseudogene
• IDs
  MGI:6098129
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:81140670-81140919 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  150 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6098129	pseudogene	Chr13:81140670-81140919 (+)
129S1/SvImJ	ENSMUSG00200005947	pseudogene	Chr13:75579853-75580102 (+)
A/J	ENSMUSG00195025775	pseudogene	Chr13:76089817-76090066 (+)
AKR/J	ENSMUSG00220016683	pseudogene	Chr13:74637001-74637250 (+)
BALB/cJ	ENSMUSG00180001465	pseudogene	Chr13:76592529-76592778 (+)
C3H/HeJ	ENSMUSG00175019712	pseudogene	Chr13:76837740-76837989 (+)
C57BL/6NJ	ENSMUSG00215002647	pseudogene	Chr13:76718391-76718640 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005004142	pseudogene	Chr13:76086324-76086573 (+)
CBA/J	ENSMUSG00210005642	pseudogene	Chr13:76127805-76128054 (+)
DBA/2J	ENSMUSG00185018215	pseudogene	Chr13:79808087-79808336 (+)
FVB/NJ	ENSMUSG00205014004	pseudogene	Chr13:75576513-75576762 (+)
JF1/MsJ	ENSUMUG00000035151	pseudogene	Chr13:79585467-79585717 (+)
LP/J	ENSMUSG00230027078	pseudogene	Chr13:89794564-89794813 (+)
NOD/ShiLtJ	ENSMUSG00190008816	pseudogene	Chr13:76138943-76139192 (+)
NZO/HlLtJ	ENSMUSG00225030539	pseudogene	Chr13:82312364-82312613 (+)
PWK/PhJ	ENSLUMG00010014526	pseudogene	Chr13:75697576-75697825 (+)
SPRET/EiJ	ENSMSPG00010001356	pseudogene	Chr13:76583962-76584211 (+)
WSB/EiJ	ENSIUOG00005017466	pseudogene	Chr13:75428716-75428965 (+)

Homology

• Gene Tree
  Gm48568
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000114773 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000114773	Ensembl Gene Model | MGI Sequence Detail	250	C57BL/6J
transcript	ENSMUST00000225882	Ensembl | MGI Sequence Detail	250	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;