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Gm48554 Pseudogene Detail
Summary
  • Symbol
    Gm48554
  • Name
    predicted gene, 48554
Location &
Maps
more
  • Sequence Map
    Chr2:86169333-86169528 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    120 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_6098108
 pseudogene Chr2:86169333-86169528 (-)
129S1/SvImJ ENSMUSG00200053849
 pseudogene Chr2:83190400-83190595 (-)
A/J ENSMUSG00195053438
 pseudogene Chr2:83261419-83261614 (-)
AKR/J ENSMUSG00220052678
 pseudogene Chr2:83140137-83140332 (-)
BALB/cJ ENSMUSG00180054962
 pseudogene Chr2:83189109-83189304 (-)
C3H/HeJ ENSMUSG00175054180
 pseudogene Chr2:83327166-83327361 (-)
C57BL/6NJ ENSMUSG00215053662
 pseudogene Chr2:83275493-83275688 (-)
CAROLI/EiJ no annotation
CAST/EiJ ENSTCUG00005052653
 pseudogene Chr2:82683268-82683463 (-)
CBA/J ENSMUSG00210043563
 pseudogene Chr2:83355075-83355270 (-)
DBA/2J ENSMUSG00185057130
 pseudogene Chr2:83185348-83185543 (-)
FVB/NJ ENSMUSG00205052086
 pseudogene Chr2:82550327-82550522 (-)
JF1/MsJ ENSUMUG00000036175
 pseudogene Chr2:83130893-83131088 (-)
LP/J ENSMUSG00230045647
 pseudogene Chr2:84936335-84936530 (-)
NOD/ShiLtJ ENSMUSG00190052055
 pseudogene Chr2:83251052-83251247 (-)
NZO/HlLtJ ENSMUSG00225053660
 pseudogene Chr2:92846108-92846303 (-)
PWK/PhJ ENSLUMG00010051903
 pseudogene Chr2:83156050-83156245 (-)
SPRET/EiJ ENSMSPG00010052092
 pseudogene Chr2:85129266-85129461 (-)
WSB/EiJ ENSIUOG00005053526
 pseudogene Chr2:83173576-83173771 (-)



Homology
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
less
  • All Sequences
    20
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000111716 Ensembl Gene Model | MGI Sequence Detail 196 C57BL/6J ±  kb
transcript ENSMUST00000215309 Ensembl | MGI Sequence Detail 196 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 1
  • Earliest
    J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory