Gm48514 Pseudogene Detail

Summary

• Symbol
  Gm48514
• Name
  predicted gene, 48514

• Feature Type
  pseudogene
• IDs
  MGI:6098049
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:129999548-129999830 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  113 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6098049	pseudogene	Chr10:129999548-129999830 (+)
129S1/SvImJ	ENSMUSG00200013843	pseudogene	Chr10:126358003-126358285 (+)
A/J	ENSMUSG00195017055	pseudogene	Chr10:126827160-126827442 (+)
AKR/J	ENSMUSG00220006709	pseudogene	Chr10:126420894-126421176 (+)
BALB/cJ	ENSMUSG00180011890	pseudogene	Chr10:126812156-126812438 (+)
C3H/HeJ	ENSMUSG00175006301	pseudogene	Chr10:126801553-126801835 (+)
C57BL/6NJ	ENSMUSG00215019868	pseudogene	Chr10:126418300-126418582 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005041503	pseudogene	Chr10:125772809-125773094 (+)
CBA/J	ENSMUSG00210009493	pseudogene	Chr10:126625855-126626137 (+)
DBA/2J	ENSMUSG00185027854	pseudogene	Chr10:126785198-126785480 (+)
FVB/NJ	no annotation
JF1/MsJ	ENSUMUG00000046399	pseudogene	Chr10:128102969-128103257 (+)
LP/J	ENSMUSG00230034214	pseudogene	Chr10:128719521-128719803 (+)
NOD/ShiLtJ	ENSMUSG00190016583	pseudogene	Chr10:126843193-126843475 (+)
NZO/HlLtJ	ENSMUSG00225013265	pseudogene	Chr10:132909806-132910088 (+)
PWK/PhJ	ENSLUMG00010010673	pseudogene	Chr10:126552259-126552547 (+)
SPRET/EiJ	ENSMSPG00010039296	pseudogene	Chr10:128516002-128516290 (+)
WSB/EiJ	ENSIUOG00005009268	pseudogene	Chr10:126431799-126432081 (+)

Homology

• Gene Tree
  Gm48514
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000112688 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000112688	Ensembl Gene Model | MGI Sequence Detail	283	C57BL/6J
transcript	ENSMUST00000218167	Ensembl | MGI Sequence Detail	283	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;