Gm48492 Gene Detail

Summary

• Symbol
  Gm48492
• Name
  predicted gene, 48492

• Feature Type
  lncRNA gene
• IDs
  MGI:6098016
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:16543529-16547765 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  52 from dbSNP Build 142
• Strain Annotations
  78

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6098016	lncRNA gene	Chr13:16543529-16547765 (-)
129S1/SvImJ	ENSMUSG00200015224	lncRNA gene	Chr4:120420549-120425680 (-)
129S1/SvImJ	ENSMUSG00200048154	lncRNA gene	Chr6:31161059-31166183 (-)
129S1/SvImJ	ENSMUSG00200004854	lncRNA gene	Chr4:52357888-52363018 (+)
129S1/SvImJ	ENSMUSG00200043244	lncRNA gene	Chr7:4910797-5035309 (+)
129S1/SvImJ	ENSMUSG00200030005	lncRNA gene	Chr10:57048486-57053617 (+)
129S1/SvImJ	ENSMUSG00200014521	lncRNA gene	Chr13:13747907-13752143 (-)
129S1/SvImJ	ENSMUSG00200006531	lncRNA gene	Chr13:72247034-72252147 (+)
A/J	ENSMUSG00195015832	lncRNA gene	Chr12:65735011-65740142 (+)
A/J	ENSMUSG00195042696	lncRNA gene	Chr13:12841480-12845716 (-)
A/J	ENSMUSG00195029262	lncRNA gene	Chr10:57360945-57366076 (+)
A/J	ENSMUSG00195026434	lncRNA gene	Chr13:72798856-72803969 (+)
A/J	ENSMUSG00195035438	lncRNA gene	Chr4:121757003-121762134 (-)
AKR/J	no annotation
BALB/cJ	ENSMUSG00180040299	lncRNA gene	Chr13:13196142-13200378 (-)
BALB/cJ	ENSMUSG00180008350	lncRNA gene	Chr11:24140460-24145591 (-)
BALB/cJ	ENSMUSG00180036948	lncRNA gene	Chr12:64734070-64739201 (+)
BALB/cJ	ENSMUSG00180001572	lncRNA gene	Chr13:73295441-73300554 (+)
BALB/cJ	ENSMUSG00180008332	lncRNA gene	Chr11:25984912-26018143 (+)
BALB/cJ	ENSMUSG00180029502	lncRNA gene	Chr10:57403223-57408354 (+)
C3H/HeJ	ENSMUSG00175027581	lncRNA gene	Chr10:57255716-57260847 (+)
C3H/HeJ	ENSMUSG00175031383	lncRNA gene	Chr12:67828382-67833513 (+)
C3H/HeJ	ENSMUSG00175004187	lncRNA gene	Chr4:78692765-78697749 (-)
C3H/HeJ	ENSMUSG00175003094	lncRNA gene	Chr1:146868177-146870766 (+)
C3H/HeJ	ENSMUSG00175037957	lncRNA gene	Chr13:13292463-13296699 (-)
C3H/HeJ	ENSMUSG00175049336	lncRNA gene	Chr1:164814248-164816837 (-)
C57BL/6NJ	ENSMUSG00215036016	lncRNA gene	Chr12:64114657-64119787 (+)
C57BL/6NJ	ENSMUSG00215002687	lncRNA gene	Chr13:73419234-73424347 (+)
C57BL/6NJ	ENSMUSG00215027438	lncRNA gene	Chr16:59841327-59846458 (+)
C57BL/6NJ	ENSMUSG00215034685	lncRNA gene	Chr10:57001362-57006493 (+)
C57BL/6NJ	ENSMUSG00215036724	lncRNA gene	Chr13:13299516-13303752 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005015325	lncRNA gene	Chr13:13427241-13430742 (-)
CBA/J	ENSMUSG00210032218	lncRNA gene	Chr12:64298372-64303503 (+)
CBA/J	ENSMUSG00210039647	lncRNA gene	Chr10:57134044-57139175 (+)
CBA/J	ENSMUSG00210035669	lncRNA gene	Chr1:146765201-146767790 (+)
CBA/J	ENSMUSG00210001388	lncRNA gene	Chr4:78286315-78291299 (-)
CBA/J	ENSMUSG00210026121	lncRNA gene	Chr7:86997020-87001620 (+)
CBA/J	ENSMUSG00210006693	lncRNA gene	Chr4:52254137-52259267 (+)
CBA/J	ENSMUSG00210032763	lncRNA gene	Chr13:13158004-13162240 (-)
DBA/2J	ENSMUSG00185005070	lncRNA gene	Chr12:66197705-66202836 (+)
DBA/2J	ENSMUSG00185043857	lncRNA gene	Chr10:57480798-57485929 (+)
DBA/2J	ENSMUSG00185019937	lncRNA gene	Chr4:52602698-52607828 (+)
DBA/2J	ENSMUSG00185014956	lncRNA gene	Chr13:13852835-13857071 (-)
DBA/2J	ENSMUSG00185007438	lncRNA gene	Chr1:151043855-151046444 (+)
FVB/NJ	ENSMUSG00205052207	lncRNA gene	Chr13:13076432-13080065 (-)
JF1/MsJ	ENSUMUG00000025555	lncRNA gene	Chr13:13703405-13707541 (-)
LP/J	ENSMUSG00230030943	lncRNA gene	Chr6:67088520-67091109 (+)
LP/J	ENSMUSG00230036550	lncRNA gene	Chr13:23261754-23265990 (-)
LP/J	ENSMUSG00230039388	lncRNA gene	Chr4:125358158-125363289 (-)
LP/J	ENSMUSG00230020277	lncRNA gene	Chr1:15053688-15058780 (+)
LP/J	ENSMUSG00230028196	lncRNA gene	Chr13:86492512-86497625 (+)
LP/J	ENSMUSG00230027747	lncRNA gene	Chr1:168545597-168548186 (-)
LP/J	ENSMUSG00230023190	lncRNA gene	Chr1:82384329-82386918 (+)
LP/J	ENSMUSG00230024627	lncRNA gene	Chr10:59283997-59289128 (+)
LP/J	ENSMUSG00230016426	lncRNA gene	Chr11:25290100-25295231 (-)
LP/J	ENSMUSG00230016471	lncRNA gene	Chr11:27206131-27211241 (+)
LP/J	ENSMUSG00230022360	lncRNA gene	Chr7:67766029-67771121 (-)
NOD/ShiLtJ	ENSMUSG00190023705	lncRNA gene	Chr13:13157955-13162191 (-)
NOD/ShiLtJ	ENSMUSG00190007559	lncRNA gene	Chr16:59980758-59985889 (+)
NOD/ShiLtJ	ENSMUSG00190001004	lncRNA gene	Chr4:77734941-77739925 (-)
NOD/ShiLtJ	ENSMUSG00190041729	lncRNA gene	Chr10:57466642-57471773 (+)
NOD/ShiLtJ	ENSMUSG00190002545	lncRNA gene	Chr6:142959766-142969889 (+)
NOD/ShiLtJ	ENSMUSG00190027564	lncRNA gene	Chr11:24339459-24344590 (-)
NOD/ShiLtJ	ENSMUSG00190027595	lncRNA gene	Chr11:26177352-26210578 (+)
NOD/ShiLtJ	ENSMUSG00190013590	lncRNA gene	Chr12:63360165-63365296 (+)
NOD/ShiLtJ	ENSMUSG00190053637	lncRNA gene	Chr7:12622861-12629239 (-)
NZO/HlLtJ	ENSMUSG00225022197	lncRNA gene	Chr6:69056796-69059385 (+)
NZO/HlLtJ	ENSMUSG00225009282	lncRNA gene	Chr2:107317241-107322372 (+)
NZO/HlLtJ	ENSMUSG00225036255	lncRNA gene	Chr16:65729219-65734350 (+)
NZO/HlLtJ	ENSMUSG00225029188	lncRNA gene	Chr17:72088498-72093589 (-)
NZO/HlLtJ	ENSMUSG00225032517	lncRNA gene	Chr13:17062582-17066818 (-)
NZO/HlLtJ	ENSMUSG00225005857	lncRNA gene	Chr4:87402776-87407760 (-)
NZO/HlLtJ	ENSMUSG00225045832	lncRNA gene	Chr10:63564926-63570057 (+)
NZO/HlLtJ	ENSMUSG00225005931	lncRNA gene	Chr1:172135100-172137689 (-)
NZO/HlLtJ	ENSMUSG00225028605	lncRNA gene	Chr13:79015629-79020742 (+)
NZO/HlLtJ	ENSMUSG00225005069	lncRNA gene	Chr1:85629190-85631779 (+)
PWK/PhJ	ENSLUMG00010034419	lncRNA gene	Chr13:12673355-12677477 (-)
SPRET/EiJ	ENSMSPG00010022310	lncRNA gene	Chr13:12289894-12293777 (-)
WSB/EiJ	ENSIUOG00005036980	lncRNA gene	Chr13:12507853-12511498 (-)

Homology

• Gene Tree
  Gm48492
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  80

• Ensembl
  ENSMUSG00000113322 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000113322	Ensembl Gene Model | MGI Sequence Detail	4237	C57BL/6J
transcript	ENSMUST00000221385	Ensembl | MGI Sequence Detail	2705	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;