Gm48478 Gene Detail

Summary

• Symbol
  Gm48478
• Name
  predicted gene, 48478

• Feature Type
  unclassified gene
• IDs
  MGI:6097993
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr9:22140274-22142598 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  178 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6097993	unclassified gene	Chr9:22140274-22142598 (+)
129S1/SvImJ	ENSMUSG00200050294	unclassified gene	Chr9:19095327-19097651 (+)
A/J	ENSMUSG00195041537	unclassified gene	Chr9:18932005-18934329 (+)
AKR/J	ENSMUSG00220034174	unclassified gene	Chr9:18934415-18936740 (+)
BALB/cJ	ENSMUSG00180043264	unclassified gene	Chr9:19066277-19068601 (+)
C3H/HeJ	ENSMUSG00175044194	unclassified gene	Chr9:19028793-19031117 (+)
C57BL/6NJ	ENSMUSG00215038724	unclassified gene	Chr9:19026098-19028422 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005035908	unclassified gene	Chr9:19078705-19081012 (+)
CBA/J	ENSMUSG00210046736	unclassified gene	Chr9:19009710-19012034 (+)
DBA/2J	ENSMUSG00185026920	unclassified gene	Chr9:19125021-19127345 (+)
FVB/NJ	ENSMUSG00205044384	unclassified gene	Chr9:19371868-19374194 (+)
JF1/MsJ	ENSUMUG00000050986	unclassified gene	Chr9:19245934-19248243 (+)
LP/J	ENSMUSG00230044928	unclassified gene	Chr9:19530994-19533320 (+)
NOD/ShiLtJ	ENSMUSG00190043063	unclassified gene	Chr9:19064758-19067083 (+)
NZO/HlLtJ	ENSMUSG00225051349	unclassified gene	Chr9:19466952-19469276 (+)
PWK/PhJ	ENSLUMG00010048465	unclassified gene	Chr9:19125891-19128198 (+)
SPRET/EiJ	ENSMSPG00010024601	unclassified gene	Chr9:19353465-19355797 (+)
WSB/EiJ	ENSIUOG00005046404	unclassified gene	Chr9:18594472-18596799 (+)

Homology

• Gene Tree
  Gm48478
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000111424 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000111424	Ensembl Gene Model | MGI Sequence Detail	2325	C57BL/6J

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;