Gm48463 Pseudogene Detail

Summary

• Symbol
  Gm48463
• Name
  predicted gene, 48463

• Feature Type
  pseudogene
• IDs
  MGI:6097978
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:86437432-86437609 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  168 from dbSNP Build 142
• Strain Annotations
  32

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6097978	pseudogene	Chr10:86437432-86437609 (+)
129S1/SvImJ	ENSMUSG00200030131	pseudogene	Chr10:82934163-82934340 (+)
129S1/SvImJ	ENSMUSG00200032167	pseudogene	Chr10:82075210-82075387 (-)
A/J	ENSMUSG00195023740	pseudogene	Chr10:82525092-82525269 (-)
A/J	ENSMUSG00195022019	pseudogene	Chr10:83379280-83379457 (+)
AKR/J	ENSMUSG00220023577	pseudogene	Chr10:82127404-82127581 (-)
AKR/J	ENSMUSG00220022089	pseudogene	Chr10:82981559-82981736 (+)
BALB/cJ	ENSMUSG00180032512	pseudogene	Chr10:83382385-83382562 (+)
BALB/cJ	ENSMUSG00180036280	pseudogene	Chr10:82528216-82528393 (-)
C3H/HeJ	ENSMUSG00175024491	pseudogene	Chr10:83272008-83272185 (+)
C3H/HeJ	ENSMUSG00175024625	pseudogene	Chr10:82404077-82404254 (-)
C57BL/6NJ	ENSMUSG00215027094	pseudogene	Chr10:82928821-82928998 (+)
C57BL/6NJ	ENSMUSG00215034648	pseudogene	Chr10:82072527-82072704 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005037865	pseudogene	Chr10:82688930-82689107 (+)
CAST/EiJ	ENSTCUG00005038257	pseudogene	Chr10:81842276-81842453 (-)
CBA/J	ENSMUSG00210034692	pseudogene	Chr10:83113401-83113578 (+)
CBA/J	ENSMUSG00210039143	pseudogene	Chr10:82254809-82254986 (-)
DBA/2J	ENSMUSG00185041819	pseudogene	Chr10:83330911-83331088 (+)
DBA/2J	ENSMUSG00185045044	pseudogene	Chr10:82468882-82469059 (-)
FVB/NJ	ENSMUSG00205023640	pseudogene	Chr10:82988769-82988946 (+)
JF1/MsJ	ENSUMUG00000031048	pseudogene	Chr10:83851969-83852146 (-)
JF1/MsJ	ENSUMUG00000028262	pseudogene	Chr10:84685863-84686040 (+)
LP/J	ENSMUSG00230019522	pseudogene	Chr10:84361327-84361504 (-)
LP/J	ENSMUSG00230018622	pseudogene	Chr10:85216825-85217002 (+)
NOD/ShiLtJ	ENSMUSG00190020317	pseudogene	Chr10:82510763-82510940 (-)
NOD/ShiLtJ	ENSMUSG00190020252	pseudogene	Chr10:83364848-83365025 (+)
NZO/HlLtJ	ENSMUSG00225053893	pseudogene	Chr10:88634018-88634195 (-)
NZO/HlLtJ	ENSMUSG00225053813	pseudogene	Chr10:89488066-89488243 (+)
PWK/PhJ	ENSLUMG00010025019	pseudogene	Chr10:82131327-82131504 (-)
PWK/PhJ	ENSLUMG00010024535	pseudogene	Chr10:82962332-82962509 (+)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005037742	pseudogene	Chr10:83059552-83059729 (+)
WSB/EiJ	ENSIUOG00005040682	pseudogene	Chr10:82226967-82227144 (-)

Homology

• Gene Tree
  Gm48463
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  34

• Ensembl
  ENSMUSG00000112638 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000112638	Ensembl Gene Model | MGI Sequence Detail	178	C57BL/6J
transcript	ENSMUST00000219676	Ensembl | MGI Sequence Detail	178	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;