Gm48431 Pseudogene Detail

Summary

• Symbol
  Gm48431
• Name
  predicted gene, 48431

• Feature Type
  pseudogene
• IDs
  MGI:6097933
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr9:36478997-36479265 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  26 from dbSNP Build 142
• Strain Annotations
  134

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6097933	pseudogene	Chr9:36478997-36479265 (+)
129S1/SvImJ	ENSMUSG00200042825	pseudogene	Chr2:11060259-11060527 (+)
129S1/SvImJ	ENSMUSG00200050758	pseudogene	Chr11:68625046-68625314 (-)
129S1/SvImJ	ENSMUSG00200015031	pseudogene	Chr5:24144738-24145006 (+)
129S1/SvImJ	ENSMUSG00200050747	pseudogene	Chr11:68155747-68156015 (+)
129S1/SvImJ	ENSMUSG00200030712	pseudogene	Chr18:78133752-78134020 (+)
129S1/SvImJ	ENSMUSG00200001946	pseudogene	Chr3:63497249-63497517 (-)
129S1/SvImJ	ENSMUSG00200002425	pseudogene	Chr1:44539514-44539782 (+)
129S1/SvImJ	ENSMUSG00200041194	pseudogene	Chr9:33456605-33456873 (+)
129S1/SvImJ	ENSMUSG00200049012	pseudogene	ChrX:121759578-121759846 (+)
129S1/SvImJ	ENSMUSG00200025175	pseudogene	Chr3:21014463-21014731 (-)
A/J	ENSMUSG00195027121	pseudogene	ChrX:98353235-98353503 (-)
A/J	ENSMUSG00195011589	pseudogene	Chr7:46424769-46425037 (+)
A/J	ENSMUSG00195051198	pseudogene	Chr9:33247989-33248257 (+)
A/J	ENSMUSG00195027628	pseudogene	Chr3:69846847-69847115 (+)
A/J	ENSMUSG00195009122	pseudogene	Chr4:51870663-51870931 (+)
A/J	ENSMUSG00195022187	pseudogene	ChrX:124792684-124792952 (+)
A/J	ENSMUSG00195028822	pseudogene	Chr1:12733446-12733714 (+)
A/J	ENSMUSG00195002276	pseudogene	Chr1:44452715-44452983 (+)
A/J	ENSMUSG00195022299	pseudogene	Chr12:16788761-16789029 (-)
A/J	ENSMUSG00195007711	pseudogene	ChrX:17521850-17522118 (+)
A/J	ENSMUSG00195030796	pseudogene	Chr16:23810158-23810426 (-)
AKR/J	ENSMUSG00220006731	pseudogene	Chr4:51635296-51635564 (+)
AKR/J	ENSMUSG00220037142	pseudogene	ChrX:9526208-9526476 (+)
AKR/J	ENSMUSG00220047659	pseudogene	Chr9:33333097-33333365 (+)
AKR/J	ENSMUSG00220001470	pseudogene	Chr4:6539248-6539516 (+)
AKR/J	ENSMUSG00220011839	pseudogene	Chr18:29329178-29329446 (+)
AKR/J	ENSMUSG00220018412	pseudogene	Chr16:79557897-79558165 (+)
AKR/J	ENSMUSG00220007558	pseudogene	Chr14:70232142-70232410 (+)
AKR/J	ENSMUSG00220007555	pseudogene	Chr14:69487483-69487751 (+)
AKR/J	ENSMUSG00220033610	pseudogene	Chr12:8744670-8744938 (+)
AKR/J	ENSMUSG00220025121	pseudogene	ChrX:42358240-42358508 (+)
AKR/J	ENSMUSG00220008902	pseudogene	Chr11:26187743-26188011 (-)
BALB/cJ	ENSMUSG00180012738	pseudogene	Chr10:50121190-50121458 (+)
BALB/cJ	ENSMUSG00180054216	pseudogene	Chr11:68254356-68254624 (+)
BALB/cJ	ENSMUSG00180053262	pseudogene	Chr12:108097457-108097725 (+)
BALB/cJ	ENSMUSG00180003645	pseudogene	Chr18:27689423-27689691 (+)
BALB/cJ	ENSMUSG00180020628	pseudogene	Chr19:18436526-18436794 (-)
BALB/cJ	ENSMUSG00180004373	pseudogene	Chr11:10979686-10979954 (-)
BALB/cJ	ENSMUSG00180035597	pseudogene	Chr19:32864133-32864401 (-)
BALB/cJ	ENSMUSG00180007511	pseudogene	Chr3:1897029-1897297 (-)
BALB/cJ	ENSMUSG00180043631	pseudogene	Chr7:131239813-131240081 (+)
BALB/cJ	ENSMUSG00180047619	pseudogene	Chr9:33376309-33376577 (+)
C3H/HeJ	ENSMUSG00175054543	pseudogene	Chr11:68201674-68201942 (+)
C3H/HeJ	ENSMUSG00175001806	pseudogene	Chr5:55945038-55945306 (-)
C3H/HeJ	ENSMUSG00175049918	pseudogene	Chr9:33377411-33377679 (+)
C3H/HeJ	ENSMUSG00175026681	pseudogene	Chr19:22804303-22804571 (-)
C3H/HeJ	ENSMUSG00175002798	pseudogene	Chr14:81983941-81984209 (+)
C3H/HeJ	ENSMUSG00175017947	pseudogene	Chr12:59032797-59033065 (-)
C3H/HeJ	ENSMUSG00175000814	pseudogene	Chr1:21923548-21923816 (-)
C3H/HeJ	ENSMUSG00175000511	pseudogene	Chr1:10969066-10969334 (-)
C3H/HeJ	ENSMUSG00175015925	pseudogene	Chr4:94754773-94755041 (-)
C3H/HeJ	ENSMUSG00175046707	pseudogene	Chr5:86227093-86227360 (+)
C57BL/6NJ	ENSMUSG00215033738	pseudogene	Chr9:33378695-33378963 (+)
C57BL/6NJ	ENSMUSG00215027325	pseudogene	Chr16:58008483-58008751 (+)
C57BL/6NJ	ENSMUSG00215004388	pseudogene	Chr18:87149918-87150186 (-)
C57BL/6NJ	ENSMUSG00215046565	pseudogene	Chr1:127451993-127452261 (-)
C57BL/6NJ	ENSMUSG00215034738	pseudogene	Chr19:32309277-32309545 (-)
C57BL/6NJ	ENSMUSG00215042800	pseudogene	Chr5:23085413-23085681 (+)
C57BL/6NJ	ENSMUSG00215000411	pseudogene	Chr1:92350270-92350538 (+)
C57BL/6NJ	ENSMUSG00215010172	pseudogene	Chr8:32607544-32607812 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005044912	pseudogene	Chr9:33343883-33343981 (+)
CBA/J	ENSMUSG00210004063	pseudogene	Chr1:191137065-191137333 (+)
CBA/J	ENSMUSG00210005952	pseudogene	Chr13:72170308-72170576 (+)
CBA/J	ENSMUSG00210034383	pseudogene	ChrX:128030511-128030779 (-)
CBA/J	ENSMUSG00210020942	pseudogene	ChrX:10053784-10054052 (+)
CBA/J	ENSMUSG00210013831	pseudogene	Chr12:8120690-8120958 (-)
CBA/J	ENSMUSG00210029774	pseudogene	Chr17:51649740-51650008 (+)
CBA/J	ENSMUSG00210011452	pseudogene	Chr8:4821218-4821486 (+)
CBA/J	ENSMUSG00210018881	pseudogene	Chr6:42863856-42864104 (-)
DBA/2J	ENSMUSG00185038931	pseudogene	Chr9:33482526-33482794 (+)
DBA/2J	ENSMUSG00185042329	pseudogene	Chr8:23027779-23028047 (+)
DBA/2J	ENSMUSG00185054964	pseudogene	Chr7:24845618-24845886 (+)
DBA/2J	ENSMUSG00185050770	pseudogene	Chr6:39238907-39239175 (-)
DBA/2J	ENSMUSG00185018181	pseudogene	Chr5:14388034-14388302 (-)
DBA/2J	ENSMUSG00185004702	pseudogene	Chr16:64621127-64621395 (+)
DBA/2J	ENSMUSG00185056391	pseudogene	Chr14:44549792-44550060 (+)
DBA/2J	ENSMUSG00185019381	pseudogene	Chr13:75858409-75858677 (+)
DBA/2J	ENSMUSG00185004266	pseudogene	Chr1:16474820-16475088 (-)
DBA/2J	ENSMUSG00185011213	pseudogene	Chr1:195737799-195738067 (+)
DBA/2J	ENSMUSG00185014374	pseudogene	Chr14:116931252-116931520 (+)
DBA/2J	ENSMUSG00185033361	pseudogene	ChrX:24137630-24137898 (+)
FVB/NJ	ENSMUSG00205001716	pseudogene	Chr7:46944387-46944655 (+)
FVB/NJ	ENSMUSG00205024848	pseudogene	Chr10:88892060-88892328 (-)
FVB/NJ	ENSMUSG00205053866	pseudogene	Chr17:38295077-38295345 (+)
FVB/NJ	ENSMUSG00205003780	pseudogene	Chr4:9079230-9079498 (+)
FVB/NJ	ENSMUSG00205005554	pseudogene	Chr10:50154778-50155046 (+)
FVB/NJ	ENSMUSG00205002869	pseudogene	ChrX:145428539-145428807 (+)
FVB/NJ	ENSMUSG00205054035	pseudogene	Chr11:68148683-68148951 (+)
FVB/NJ	ENSMUSG00205040813	pseudogene	Chr9:33747744-33748012 (+)
JF1/MsJ	ENSUMUG00000004258	pseudogene	Chr3:114492863-114493131 (+)
LP/J	ENSMUSG00230034376	pseudogene	Chr1:174203925-174204193 (+)
LP/J	ENSMUSG00230020068	pseudogene	ChrX:60743128-60743394 (-)
LP/J	ENSMUSG00230048980	pseudogene	Chr7:15788198-15788466 (+)
LP/J	ENSMUSG00230003711	pseudogene	Chr5:7462206-7462474 (+)
LP/J	ENSMUSG00230006740	pseudogene	Chr2:109563405-109563673 (+)
LP/J	ENSMUSG00230036493	pseudogene	Chr13:64390757-64391025 (+)
LP/J	ENSMUSG00230023650	pseudogene	Chr2:65876035-65876303 (+)
LP/J	ENSMUSG00230000598	pseudogene	Chr1:151134781-151135049 (-)
LP/J	ENSMUSG00230008202	pseudogene	Chr13:13654902-13655170 (-)
NOD/ShiLtJ	ENSMUSG00190000786	pseudogene	Chr1:105539890-105540138 (+)
NOD/ShiLtJ	ENSMUSG00190009281	pseudogene	Chr7:29091408-29091676 (+)
NOD/ShiLtJ	ENSMUSG00190054011	pseudogene	Chr17:32946974-32947222 (+)
NOD/ShiLtJ	ENSMUSG00190054334	pseudogene	Chr11:68254715-68254983 (+)
NOD/ShiLtJ	ENSMUSG00190011861	pseudogene	Chr17:51652220-51652488 (+)
NOD/ShiLtJ	ENSMUSG00190006814	pseudogene	Chr9:26590027-26590295 (-)
NOD/ShiLtJ	ENSMUSG00190003554	pseudogene	Chr18:87364302-87364570 (-)
NOD/ShiLtJ	ENSMUSG00190017355	pseudogene	Chr12:41297383-41297651 (-)
NOD/ShiLtJ	ENSMUSG00190030536	pseudogene	Chr9:33514611-33514879 (+)
NOD/ShiLtJ	ENSMUSG00190000759	pseudogene	Chr1:98101157-98101425 (+)
NOD/ShiLtJ	ENSMUSG00190014705	pseudogene	Chr12:19670060-19670328 (+)
NOD/ShiLtJ	ENSMUSG00190013755	pseudogene	Chr13:33812953-33813221 (+)
NZO/HlLtJ	ENSMUSG00225034379	pseudogene	Chr12:101298324-101298592 (+)
NZO/HlLtJ	ENSMUSG00225006039	pseudogene	Chr1:19854257-19854525 (-)
NZO/HlLtJ	ENSMUSG00225006022	pseudogene	Chr1:17033484-17033752 (+)
NZO/HlLtJ	ENSMUSG00225041620	pseudogene	ChrX:32174358-32174626 (-)
NZO/HlLtJ	ENSMUSG00225012190	pseudogene	Chr7:55253457-55253725 (-)
NZO/HlLtJ	ENSMUSG00225011784	pseudogene	Chr4:117459676-117459944 (-)
NZO/HlLtJ	ENSMUSG00225029951	pseudogene	Chr19:33797007-33797275 (-)
NZO/HlLtJ	ENSMUSG00225029880	pseudogene	Chr16:73523140-73523408 (+)
NZO/HlLtJ	ENSMUSG00225001710	pseudogene	Chr3:6349558-6349826 (-)
PWK/PhJ	ENSLUMG00010047956	pseudogene	Chr9:33518893-33518943 (+)
SPRET/EiJ	ENSMSPG00010006909	pseudogene	Chr15:51402635-51402903 (+)
WSB/EiJ	ENSIUOG00005006741	pseudogene	Chr18:67289430-67289698 (-)
WSB/EiJ	ENSIUOG00005043703	pseudogene	Chr10:61290556-61290824 (+)
WSB/EiJ	ENSIUOG00005016936	pseudogene	Chr8:78543838-78544106 (-)
WSB/EiJ	ENSIUOG00005045940	pseudogene	Chr9:33000518-33000786 (+)
WSB/EiJ	ENSIUOG00005053222	pseudogene	Chr7:8663367-8663635 (+)
WSB/EiJ	ENSIUOG00005037192	pseudogene	Chr13:99025808-99026076 (+)
WSB/EiJ	ENSIUOG00005009994	pseudogene	Chr18:41217683-41217951 (-)
WSB/EiJ	ENSIUOG00005006961	pseudogene	Chr15:60509082-60509350 (-)
WSB/EiJ	ENSIUOG00005026071	pseudogene	Chr14:9829445-9829713 (+)
WSB/EiJ	ENSIUOG00005032412	pseudogene	Chr14:105047033-105047301 (-)
WSB/EiJ	ENSIUOG00005008675	pseudogene	Chr18:77661741-77662009 (+)

Homology

• Gene Tree
  Gm48431
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Endonuclease-mediated
  1
• Genomic Mutations
  1 involving Gm48431
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  136

• Ensembl
  ENSMUSG00000110880 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000110880	Ensembl Gene Model | MGI Sequence Detail	269	C57BL/6J
transcript	ENSMUST00000214753	Ensembl | MGI Sequence Detail	269	Not Applicable

References

• Summaries
  All 3

  Phenotypes 2
• Earliest
  J:279308 Fujihara Y, et al., Identification of multiple male reproductive tract-specific proteins that regulate sperm migration through the oviduct in mice. Proc Natl Acad Sci U S A. 2019 Sep 10;116(37):18498-18506
• Latest
  J:369525 Noda T, et al., Multiple genes in the Pate5-13 genomic region contribute to ADAM3 processing. Biol Reprod. 2024 Jan 13;