Gm48419 Gene Detail

Summary

• Symbol
  Gm48419
• Name
  predicted gene, 48419

• Feature Type
  lncRNA gene
• IDs
  MGI:6097912
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:68113602-68118358 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6097912	lncRNA gene	Chr13:68113602-68118358 (+)
129S1/SvImJ	no annotation
A/J	ENSMUSG00195032013	lncRNA gene	Chr13:63598507-63603270 (+)
AKR/J	ENSMUSG00220040953	lncRNA gene	Chr13:62164310-62169071 (+)
BALB/cJ	no annotation
C3H/HeJ	ENSMUSG00175008571	lncRNA gene	Chr13:64382394-64387158 (+)
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005012003	lncRNA gene	Chr13:63704004-63713724 (+)
CBA/J	ENSMUSG00210009944	lncRNA gene	Chr13:63252759-63257407 (+)
DBA/2J	ENSMUSG00185011178	lncRNA gene	Chr13:66948387-66953036 (+)
DBA/2J	ENSMUSG00185009890	lncRNA gene	Chr13:66964110-66968877 (+)
FVB/NJ	no annotation
JF1/MsJ	ENSUMUG00000042845	lncRNA gene	Chr13:66649713-66654469 (+)
LP/J	ENSMUSG00230034900	lncRNA gene	Chr13:77144338-77149092 (+)
NOD/ShiLtJ	ENSMUSG00190044897	lncRNA gene	Chr13:63266490-63271257 (+)
NOD/ShiLtJ	ENSMUSG00190045271	lncRNA gene	Chr13:63235105-63239753 (+)
NZO/HlLtJ	ENSMUSG00225048968	lncRNA gene	Chr13:69362441-69367089 (+)
NZO/HlLtJ	ENSMUSG00225048017	lncRNA gene	Chr13:69378146-69382913 (+)
PWK/PhJ	ENSLUMG00010012513	lncRNA gene	Chr13:63078930-63081829 (-)
PWK/PhJ	ENSLUMG00010012517	lncRNA gene	Chr13:62736214-62745182 (+)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005023115	lncRNA gene	Chr13:62371645-62376401 (+)
WSB/EiJ	ENSIUOG00005025423	lncRNA gene	Chr13:62547381-62550092 (+)

Homology

• Gene Tree
  Gm48419
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000112984 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000112984	Ensembl Gene Model | MGI Sequence Detail	4757	C57BL/6J
transcript	ENSMUST00000220881	Ensembl | MGI Sequence Detail	2884	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;