Gm48371 Gene Detail

Summary

• Symbol
  Gm48371
• Name
  predicted gene, 48371

• Feature Type
  lncRNA gene
• IDs
  MGI:6097844
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr14:12940356-13077359 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  4575 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6097844	lncRNA gene	Chr14:12940356-13077359 (+)
129S1/SvImJ	ENSMUSG00200025323	lncRNA gene	Chr14:9671403-9697549 (+)
A/J	ENSMUSG00195022013	lncRNA gene	Chr14:10507779-10533964 (+)
AKR/J	ENSMUSG00220024058	lncRNA gene	Chr14:9656299-9682479 (+)
BALB/cJ	ENSMUSG00180024335	lncRNA gene	Chr14:9806080-9832405 (+)
C3H/HeJ	ENSMUSG00175009691	lncRNA gene	Chr14:9858003-9884325 (+)
C57BL/6NJ	ENSMUSG00215022961	lncRNA gene	Chr14:10047654-10073834 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005031319	lncRNA gene	Chr14:9706487-9733050 (+)
CBA/J	ENSMUSG00210036810	lncRNA gene	Chr14:10073119-10099440 (+)
DBA/2J	ENSMUSG00185038489	lncRNA gene	Chr14:10081554-10107877 (+)
FVB/NJ	ENSMUSG00205024947	lncRNA gene	Chr14:10003311-10029635 (+)
JF1/MsJ	ENSUMUG00000028313	lncRNA gene	Chr14:10064186-10090351 (+)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190037094	lncRNA gene	Chr14:10084253-10110434 (+)
NZO/HlLtJ	ENSMUSG00225036864	lncRNA gene	Chr14:10457302-10483502 (+)
PWK/PhJ	ENSLUMG00010039341	lncRNA gene	Chr14:31359417-31386016 (+)
SPRET/EiJ	ENSMSPG00010032621	lncRNA gene	Chr14:10435105-10473940 (+)
WSB/EiJ	ENSIUOG00005025384	lncRNA gene	Chr14:9908142-9934513 (+)

Homology

• Gene Tree
  Gm48371
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  31

• Ensembl
  ENSMUSG00000114298 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000114298	Ensembl Gene Model | MGI Sequence Detail	137004	C57BL/6J
transcript	ENSMUST00000337321	Ensembl | MGI Sequence Detail	1846	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;