Gm48362 Gene Detail

Summary

• Symbol
  Gm48362
• Name
  predicted gene, 48362

• Feature Type
  lncRNA gene
• IDs
  MGI:6097831
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr9:25766611-25770948 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  81 from dbSNP Build 142
• Strain Annotations
  83

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6097831	lncRNA gene	Chr9:25766611-25770948 (-)
129S1/SvImJ	ENSMUSG00200010977	lncRNA gene	Chr4:90108550-90112884 (+)
129S1/SvImJ	ENSMUSG00200002633	lncRNA gene	Chr2:91566203-91570539 (+)
129S1/SvImJ	ENSMUSG00200042839	lncRNA gene	Chr2:17338588-17342925 (-)
129S1/SvImJ	ENSMUSG00200000689	lncRNA gene	Chr4:69918204-69922540 (+)
129S1/SvImJ	ENSMUSG00200004535	lncRNA gene	Chr3:124395297-124399634 (-)
129S1/SvImJ	ENSMUSG00200054275	lncRNA gene	Chr15:80207499-80211836 (+)
129S1/SvImJ	ENSMUSG00200038895	lncRNA gene	Chr14:25264472-25268808 (-)
129S1/SvImJ	ENSMUSG00200013474	lncRNA gene	Chr7:59154030-59158367 (-)
129S1/SvImJ	ENSMUSG00200003737	lncRNA gene	Chr4:47947593-47951930 (+)
129S1/SvImJ	ENSMUSG00200008315	lncRNA gene	Chr9:22750083-22754420 (-)
A/J	ENSMUSG00195006289	lncRNA gene	Chr9:22562234-22566571 (-)
A/J	ENSMUSG00195000968	lncRNA gene	Chr4:70456402-70460740 (+)
A/J	ENSMUSG00195009434	lncRNA gene	Chr3:124534088-124538425 (-)
A/J	ENSMUSG00195020868	lncRNA gene	Chr2:17472536-17476873 (-)
A/J	ENSMUSG00195015077	lncRNA gene	Chr11:24457903-24462241 (-)
A/J	ENSMUSG00195009951	lncRNA gene	Chr4:90657624-90661957 (+)
AKR/J	ENSMUSG00220047353	lncRNA gene	Chr6:66237299-66241635 (+)
AKR/J	ENSMUSG00220018913	lncRNA gene	Chr4:69879242-69883580 (+)
AKR/J	ENSMUSG00220014369	lncRNA gene	Chr2:17593533-17597870 (-)
AKR/J	ENSMUSG00220010724	lncRNA gene	Chr9:22560180-22564517 (-)
AKR/J	ENSMUSG00220020481	lncRNA gene	Chr4:90066829-90071162 (+)
BALB/cJ	ENSMUSG00180000876	lncRNA gene	Chr4:69415983-69420321 (+)
BALB/cJ	ENSMUSG00180004028	lncRNA gene	Chr3:124461190-124465527 (-)
BALB/cJ	ENSMUSG00180031740	lncRNA gene	Chr4:50007025-50011540 (-)
BALB/cJ	ENSMUSG00180006993	lncRNA gene	Chr9:22696410-22700747 (-)
BALB/cJ	ENSMUSG00180040139	lncRNA gene	Chr2:17462328-17466665 (-)
BALB/cJ	ENSMUSG00180006614	lncRNA gene	Chr4:89604914-89609247 (+)
C3H/HeJ	ENSMUSG00175008428	lncRNA gene	Chr4:90544149-90548482 (+)
C3H/HeJ	ENSMUSG00175019675	lncRNA gene	Chr9:22672897-22677234 (-)
C3H/HeJ	ENSMUSG00175015055	lncRNA gene	Chr3:124014855-124019192 (-)
C3H/HeJ	ENSMUSG00175017600	lncRNA gene	Chr11:24476144-24480482 (-)
C3H/HeJ	ENSMUSG00175006802	lncRNA gene	Chr4:70377446-70381784 (+)
C57BL/6NJ	ENSMUSG00215000994	lncRNA gene	Chr4:70344984-70349322 (+)
C57BL/6NJ	ENSMUSG00215051181	lncRNA gene	Chr14:42127630-42131928 (+)
C57BL/6NJ	ENSMUSG00215023662	lncRNA gene	Chr4:90515870-90520203 (+)
C57BL/6NJ	ENSMUSG00215043317	lncRNA gene	ChrX:57721153-57725490 (+)
C57BL/6NJ	ENSMUSG00215008982	lncRNA gene	Chr9:22658215-22662552 (-)
C57BL/6NJ	ENSMUSG00215036072	lncRNA gene	Chr2:17512615-17516952 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	ENSMUSG00210022179	lncRNA gene	Chr9:22714621-22718958 (-)
CBA/J	ENSMUSG00210000739	lncRNA gene	Chr4:69976834-69981172 (+)
CBA/J	ENSMUSG00210004776	lncRNA gene	Chr3:124638051-124642388 (-)
CBA/J	ENSMUSG00210016820	lncRNA gene	Chr4:90120721-90125054 (+)
DBA/2J	ENSMUSG00185015991	lncRNA gene	Chr4:70515413-70519749 (+)
DBA/2J	ENSMUSG00185004533	lncRNA gene	Chr12:16500293-16504630 (-)
DBA/2J	ENSMUSG00185040928	lncRNA gene	Chr2:17387113-17391450 (-)
DBA/2J	ENSMUSG00185002556	lncRNA gene	Chr9:22754960-22759297 (-)
DBA/2J	ENSMUSG00185003185	lncRNA gene	Chr4:90923722-90928055 (+)
DBA/2J	ENSMUSG00185004573	lncRNA gene	Chr12:18200079-18204416 (-)
DBA/2J	ENSMUSG00185020119	lncRNA gene	Chr11:24544202-24548540 (-)
FVB/NJ	ENSMUSG00205001115	lncRNA gene	Chr4:68737656-68741994 (+)
FVB/NJ	ENSMUSG00205004485	lncRNA gene	Chr9:23044805-23049142 (-)
FVB/NJ	ENSMUSG00205015917	lncRNA gene	Chr4:89069452-89073784 (+)
FVB/NJ	ENSMUSG00205032250	lncRNA gene	Chr7:60880136-60884473 (-)
JF1/MsJ	ENSUMUG00000016629	lncRNA gene	Chr9:22887420-22888102 (-)
LP/J	ENSMUSG00230017105	lncRNA gene	Chr14:18163226-18167564 (+)
LP/J	ENSMUSG00230017064	lncRNA gene	Chr14:16084247-16088585 (+)
LP/J	ENSMUSG00230009013	lncRNA gene	Chr4:74010892-74015228 (+)
LP/J	ENSMUSG00230005284	lncRNA gene	Chr4:51749934-51754271 (+)
LP/J	ENSMUSG00230005390	lncRNA gene	Chr9:23154781-23159118 (-)
LP/J	ENSMUSG00230022166	lncRNA gene	Chr13:30886350-30890687 (-)
LP/J	ENSMUSG00230008434	lncRNA gene	Chr12:25166688-25171025 (-)
LP/J	ENSMUSG00230017226	lncRNA gene	Chr14:20094486-20098824 (+)
LP/J	ENSMUSG00230023763	lncRNA gene	Chr4:94217587-94221921 (+)
LP/J	ENSMUSG00230004866	lncRNA gene	Chr3:127228458-127232795 (-)
LP/J	ENSMUSG00230038366	lncRNA gene	Chr14:37288479-37292815 (-)
NOD/ShiLtJ	ENSMUSG00190007783	lncRNA gene	Chr5:76292259-76296594 (-)
NOD/ShiLtJ	ENSMUSG00190021140	lncRNA gene	Chr7:61008898-61013235 (-)
NOD/ShiLtJ	ENSMUSG00190046826	lncRNA gene	Chr6:66976646-66980982 (+)
NOD/ShiLtJ	ENSMUSG00190042729	lncRNA gene	Chr13:20557630-20561967 (-)
NOD/ShiLtJ	ENSMUSG00190006725	lncRNA gene	Chr9:22747952-22752289 (-)
NOD/ShiLtJ	ENSMUSG00190049329	lncRNA gene	Chr4:103282847-103292189 (-)
NOD/ShiLtJ	ENSMUSG00190018423	lncRNA gene	Chr4:89565011-89569344 (+)
NOD/ShiLtJ	ENSMUSG00190015178	lncRNA gene	Chr2:17445928-17450265 (-)
NOD/ShiLtJ	ENSMUSG00190019217	lncRNA gene	Chr17:44140218-44144555 (-)
NZO/HlLtJ	ENSMUSG00225021669	lncRNA gene	Chr3:109933306-109937072 (-)
NZO/HlLtJ	ENSMUSG00225028149	lncRNA gene	Chr4:79020738-79025075 (+)
NZO/HlLtJ	ENSMUSG00225015071	lncRNA gene	Chr9:23177519-23181856 (-)
NZO/HlLtJ	ENSMUSG00225022683	lncRNA gene	Chr11:27629610-27633948 (-)
NZO/HlLtJ	ENSMUSG00225035691	lncRNA gene	Chr12:23842524-23846861 (-)
NZO/HlLtJ	ENSMUSG00225035843	lncRNA gene	Chr12:27349768-27354105 (-)
NZO/HlLtJ	ENSMUSG00225001969	lncRNA gene	Chr2:27048651-27052988 (-)
NZO/HlLtJ	ENSMUSG00225003997	lncRNA gene	Chr4:99367723-99372056 (+)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm48362
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  85

• Ensembl
  ENSMUSG00000110866 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000110866	Ensembl Gene Model | MGI Sequence Detail	4338	C57BL/6J
transcript	ENSMUST00000216055	Ensembl | MGI Sequence Detail	3205	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;