Gm48326 Pseudogene Detail

Summary

• Symbol
  Gm48326
• Name
  predicted gene, 48326

• Feature Type
  pseudogene
• IDs
  MGI:6097781
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:10341158-10341278 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  131 from dbSNP Build 142
• Strain Annotations
  20

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6097781	pseudogene	Chr10:10341158-10341278 (-)
129S1/SvImJ	ENSMUSG00200011066	pseudogene	Chr10:7350846-7350966 (-)
A/J	ENSMUSG00195010141	pseudogene	Chr10:7237534-7237654 (-)
AKR/J	ENSMUSG00220007686	pseudogene	Chr10:7360702-7360822 (-)
BALB/cJ	ENSMUSG00180025410	pseudogene	Chr10:7399509-7399629 (-)
C3H/HeJ	ENSMUSG00175013150	pseudogene	Chr10:7390256-7390376 (-)
C57BL/6NJ	ENSMUSG00215005666	pseudogene	Chr10:7285038-7285158 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005018004	pseudogene	Chr10:7374004-7374124 (-)
CBA/J	ENSMUSG00210012606	pseudogene	Chr10:7335902-7336022 (-)
DBA/2J	ENSMUSG00185010568	pseudogene	Chr10:7384901-7385021 (-)
FVB/NJ	ENSMUSG00205009057	pseudogene	Chr10:7359966-7360086 (-)
JF1/MsJ	ENSUMUG00000036297	pseudogene	Chr10:7445902-7446022 (-)
JF1/MsJ	ENSUMUG00000055380	pseudogene	Chr5:138948160-138948282 (+)
LP/J	ENSMUSG00230018069	pseudogene	Chr10:8998889-8999009 (-)
NOD/ShiLtJ	ENSMUSG00190026350	pseudogene	Chr10:7349192-7349312 (-)
NZO/HlLtJ	ENSMUSG00225017550	pseudogene	Chr10:13533518-13533638 (-)
PWK/PhJ	ENSLUMG00010019631	pseudogene	Chr5:130673863-130673985 (+)
PWK/PhJ	ENSLUMG00010021598	pseudogene	Chr10:7180524-7180644 (-)
SPRET/EiJ	ENSMSPG00010007110	pseudogene	Chr10:7518808-7518928 (-)
WSB/EiJ	ENSIUOG00005014179	pseudogene	Chr10:7275180-7275300 (-)

Homology

• Gene Tree
  Gm48326
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22

• Ensembl
  ENSMUSG00000112351 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000112351	Ensembl Gene Model | MGI Sequence Detail	121	C57BL/6J
transcript	ENSMUST00000218096	Ensembl | MGI Sequence Detail	121	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;