Gm48311 Gene Detail

Summary

• Symbol
  Gm48311
• Name
  predicted gene, 48311

• Feature Type
  lncRNA gene
• IDs
  MGI:6097761
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:13532315-13537052 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  263 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6097761	lncRNA gene	Chr12:13532315-13537052 (-)
129S1/SvImJ	ENSMUSG00200024424	lncRNA gene	Chr12:10542961-10545206 (-)
A/J	ENSMUSG00195020999	lncRNA gene	Chr12:10560809-10563050 (-)
AKR/J	ENSMUSG00220029155	lncRNA gene	Chr12:10654226-10656477 (-)
BALB/cJ	ENSMUSG00180009559	lncRNA gene	Chr12:10546777-10549016 (-)
C3H/HeJ	ENSMUSG00175005829	lncRNA gene	Chr12:10618034-10620273 (-)
C57BL/6NJ	ENSMUSG00215006478	lncRNA gene	Chr12:10381753-10383992 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005023196	lncRNA gene	Chr12:10115578-10117862 (-)
CBA/J	ENSMUSG00210007723	lncRNA gene	Chr12:10632272-10634511 (-)
DBA/2J	ENSMUSG00185003760	lncRNA gene	Chr12:10549995-10552234 (-)
FVB/NJ	ENSMUSG00205001788	lncRNA gene	Chr12:10356422-10358659 (-)
JF1/MsJ	ENSUMUG00000010878	lncRNA gene	Chr12:10447327-10449654 (-)
LP/J	ENSMUSG00230022739	lncRNA gene	Chr12:12362390-12364635 (-)
NOD/ShiLtJ	ENSMUSG00190014121	lncRNA gene	Chr12:11787118-11789358 (-)
NZO/HlLtJ	ENSMUSG00225030100	lncRNA gene	Chr12:14454258-14456503 (-)
PWK/PhJ	ENSLUMG00010017653	lncRNA gene	Chr12:10203420-10205752 (-)
SPRET/EiJ	ENSMSPG00010002981	lncRNA gene	Chr12:11042638-11043474 (-)
WSB/EiJ	ENSIUOG00005001854	lncRNA gene	Chr12:10583474-10585605 (-)

Homology

• Gene Tree
  Gm48311
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000113058 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000113058	Ensembl Gene Model | MGI Sequence Detail	4738	C57BL/6J
transcript	ENSMUST00000255888	Ensembl | MGI Sequence Detail	757	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;