Gm48304 Pseudogene Detail

Summary

• Symbol
  Gm48304
• Name
  predicted gene, 48304

• Feature Type
  pseudogene
• IDs
  MGI:6097750
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:61303424-61303751 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  186 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6097750	pseudogene	Chr12:61303424-61303751 (+)
129S1/SvImJ	ENSMUSG00200004222	pseudogene	Chr12:53226919-53227246 (+)
A/J	ENSMUSG00195001695	pseudogene	Chr12:55919201-55919528 (+)
AKR/J	ENSMUSG00220015895	pseudogene	Chr12:53863296-53863623 (+)
BALB/cJ	ENSMUSG00180007603	pseudogene	Chr12:54936510-54936837 (+)
C3H/HeJ	ENSMUSG00175017645	pseudogene	Chr12:57985917-57986244 (+)
C57BL/6NJ	ENSMUSG00215010252	pseudogene	Chr12:54173952-54174279 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005012382	pseudogene	Chr12:54269275-54269602 (+)
CBA/J	ENSMUSG00210014502	pseudogene	Chr12:54444089-54444416 (+)
DBA/2J	ENSMUSG00185001214	pseudogene	Chr12:56380543-56380870 (+)
FVB/NJ	ENSMUSG00205005856	pseudogene	Chr12:54187813-54188140 (+)
JF1/MsJ	ENSUMUG00000010538	pseudogene	Chr12:60355847-60356173 (+)
LP/J	ENSMUSG00230011807	pseudogene	Chr12:63381309-63381636 (+)
NOD/ShiLtJ	ENSMUSG00190007184	pseudogene	Chr12:53401050-53401377 (+)
NZO/HlLtJ	ENSMUSG00225029730	pseudogene	Chr12:65466261-65466588 (+)
PWK/PhJ	ENSLUMG00010002592	pseudogene	Chr12:54392650-54392976 (+)
SPRET/EiJ	ENSMSPG00010011127	pseudogene	Chr12:55993610-55993937 (+)
WSB/EiJ	ENSIUOG00005000992	pseudogene	Chr12:54198517-54198844 (+)

Homology

• Gene Tree
  Gm48304
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000113518 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000113518	Ensembl Gene Model | MGI Sequence Detail	328	C57BL/6J
transcript	ENSMUST00000221398	Ensembl | MGI Sequence Detail	328	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;