Gm48286 Gene Detail

Summary

• Symbol
  Gm48286
• Name
  predicted gene, 48286

• Feature Type
  lncRNA gene
• IDs
  MGI:6097722
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:111583304-111603822 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  447 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6097722	lncRNA gene	Chr12:111583304-111603822 (+)
129S1/SvImJ	ENSMUSG00200028029	lncRNA gene	Chr12:103361474-103382002 (+)
A/J	ENSMUSG00195046830	lncRNA gene	Chr12:105880232-105901053 (+)
AKR/J	ENSMUSG00220037399	lncRNA gene	Chr12:103775340-103796157 (+)
BALB/cJ	ENSMUSG00180049708	lncRNA gene	Chr12:105124592-105145120 (+)
C3H/HeJ	ENSMUSG00175042202	lncRNA gene	Chr12:107691729-107712541 (+)
C57BL/6NJ	ENSMUSG00215051418	lncRNA gene	Chr12:104397529-104418056 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005043540	lncRNA gene	Chr12:103876334-103897109 (+)
CBA/J	ENSMUSG00210041073	lncRNA gene	Chr12:104753136-104773950 (+)
DBA/2J	ENSMUSG00185032088	lncRNA gene	Chr12:106583220-106604021 (+)
FVB/NJ	ENSMUSG00205046527	lncRNA gene	Chr12:103811099-103831696 (+)
JF1/MsJ	ENSUMUG00000025481	lncRNA gene	Chr12:111355766-111376306 (+)
LP/J	ENSMUSG00230044697	lncRNA gene	Chr12:113626062-113646588 (+)
NOD/ShiLtJ	ENSMUSG00190035830	lncRNA gene	Chr12:81404145-81424962 (-)
NZO/HlLtJ	ENSMUSG00225043123	lncRNA gene	Chr12:115373309-115393906 (+)
PWK/PhJ	ENSLUMG00010048697	lncRNA gene	Chr12:104806305-104826842 (+)
SPRET/EiJ	ENSMSPG00010019805	lncRNA gene	Chr12:107089660-107110410 (+)
WSB/EiJ	ENSIUOG00005039640	lncRNA gene	Chr12:103788933-103809752 (+)

Homology

• Gene Tree
  Gm48286
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000113910 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000113910	Ensembl Gene Model | MGI Sequence Detail	20519	C57BL/6J
transcript	ENSMUST00000220971	Ensembl | MGI Sequence Detail	644	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;