Gm48282 Pseudogene Detail

Summary

• Symbol
  Gm48282
• Name
  predicted gene, 48282

• Feature Type
  pseudogene
• IDs
  MGI:6097715
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:9916664-9917170 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  113 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6097715	pseudogene	Chr10:9916664-9917170 (+)
129S1/SvImJ	ENSMUSG00200011365	pseudogene	Chr10:6918571-6919077 (+)
A/J	ENSMUSG00195010391	pseudogene	Chr10:6816212-6816718 (+)
AKR/J	ENSMUSG00220007834	pseudogene	Chr10:6939362-6939868 (+)
BALB/cJ	ENSMUSG00180025910	pseudogene	Chr10:6978189-6978695 (+)
C3H/HeJ	ENSMUSG00175013432	pseudogene	Chr10:6968935-6969441 (+)
C57BL/6NJ	ENSMUSG00215005448	pseudogene	Chr10:6860392-6860898 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005018521	pseudogene	Chr10:6941144-6941650 (+)
CBA/J	ENSMUSG00210012659	pseudogene	Chr10:6914604-6915110 (+)
DBA/2J	ENSMUSG00185010952	pseudogene	Chr10:6952499-6953005 (+)
FVB/NJ	ENSMUSG00205009216	pseudogene	Chr10:6922319-6922825 (+)
JF1/MsJ	ENSUMUG00000038890	pseudogene	Chr10:7028788-7029338 (+)
LP/J	ENSMUSG00230017996	pseudogene	Chr10:8577602-8578108 (+)
NOD/ShiLtJ	ENSMUSG00190027413	pseudogene	Chr10:6917927-6918433 (+)
NZO/HlLtJ	ENSMUSG00225017388	pseudogene	Chr10:13101261-13101767 (+)
PWK/PhJ	ENSLUMG00010021572	pseudogene	Chr10:6760868-6761400 (+)
SPRET/EiJ	ENSMSPG00010007214	pseudogene	Chr10:7105966-7106484 (+)
WSB/EiJ	ENSIUOG00005014376	pseudogene	Chr10:6850490-6850996 (+)

Homology

• Gene Tree
  Gm48282
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000112059 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000112059	Ensembl Gene Model | MGI Sequence Detail	507	C57BL/6J
transcript	ENSMUST00000219625	Ensembl | MGI Sequence Detail	507	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;