Gm48281 Gene Detail

Summary

• Symbol
  Gm48281
• Name
  predicted gene, 48281

• Feature Type
  lncRNA gene
• IDs
  MGI:6097713
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:9976164-9985843 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  380 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6097713	lncRNA gene	Chr10:9976164-9985843 (-)
129S1/SvImJ	ENSMUSG00200011302	lncRNA gene	Chr10:6977953-6987647 (-)
A/J	ENSMUSG00195010338	lncRNA gene	Chr10:6875834-6885545 (-)
AKR/J	ENSMUSG00220007808	lncRNA gene	Chr10:6998983-7008694 (-)
BALB/cJ	ENSMUSG00180025692	lncRNA gene	Chr10:7037816-7047527 (-)
C3H/HeJ	ENSMUSG00175013359	lncRNA gene	Chr10:7028553-7038260 (-)
C57BL/6NJ	ENSMUSG00215005411	lncRNA gene	Chr10:6919914-6929593 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005018487	lncRNA gene	Chr10:7001128-7010885 (-)
CBA/J	ENSMUSG00210012646	lncRNA gene	Chr10:6974221-6983932 (-)
DBA/2J	ENSMUSG00185010895	lncRNA gene	Chr10:7012021-7021715 (-)
FVB/NJ	ENSMUSG00205009185	lncRNA gene	Chr10:6981872-6991571 (-)
JF1/MsJ	ENSUMUG00000038638	lncRNA gene	Chr10:7082021-7091706 (-)
LP/J	ENSMUSG00230017802	lncRNA gene	Chr10:8637220-8646931 (-)
NOD/ShiLtJ	ENSMUSG00190027201	lncRNA gene	Chr10:6977535-6987228 (-)
NZO/HlLtJ	ENSMUSG00225017088	lncRNA gene	Chr10:13160648-13170342 (-)
PWK/PhJ	ENSLUMG00010021517	lncRNA gene	Chr10:6815116-6824824 (-)
SPRET/EiJ	ENSMSPG00010007194	lncRNA gene	Chr10:7159076-7168874 (-)
WSB/EiJ	ENSIUOG00005014327	lncRNA gene	Chr10:6910074-6919777 (-)

Homology

• Gene Tree
  Gm48281
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000112713 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000112713	Ensembl Gene Model | MGI Sequence Detail	9680	C57BL/6J
transcript	ENSMUST00000217707	Ensembl | MGI Sequence Detail	716	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;