Gm48268 Pseudogene Detail

Summary

• Symbol
  Gm48268
• Name
  predicted gene, 48268

• Feature Type
  pseudogene
• IDs
  MGI:6097692
  NCBI Gene: 118567963
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:59401928-59402395 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  129 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6097692	pseudogene	Chr12:59401605-59402395 (-)
129S1/SvImJ	ENSMUSG00200004555	pseudogene	Chr12:51296360-51297150 (-)
A/J	ENSMUSG00195001736	pseudogene	Chr12:53951089-53951879 (-)
AKR/J	ENSMUSG00220015925	pseudogene	Chr12:51957086-51957876 (-)
BALB/cJ	ENSMUSG00180007683	pseudogene	Chr12:52968480-52969270 (-)
C3H/HeJ	ENSMUSG00175017478	pseudogene	Chr12:56010541-56011331 (-)
C57BL/6NJ	ENSMUSG00215009721	pseudogene	Chr12:52271453-52272243 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005012391	pseudogene	Chr12:52320249-52321039 (-)
CBA/J	ENSMUSG00210014167	pseudogene	Chr12:52476273-52477063 (-)
DBA/2J	ENSMUSG00185001302	pseudogene	Chr12:54421237-54422027 (-)
FVB/NJ	ENSMUSG00205005632	pseudogene	Chr12:52254664-52255454 (-)
JF1/MsJ	ENSUMUG00000008609	pseudogene	Chr12:58438095-58438979 (-)
LP/J	ENSMUSG00230011705	pseudogene	Chr12:61418305-61419095 (-)
NOD/ShiLtJ	ENSMUSG00190007164	pseudogene	Chr12:51447100-51447890 (-)
NZO/HlLtJ	ENSMUSG00225029690	pseudogene	Chr12:63565653-63566443 (-)
PWK/PhJ	ENSLUMG00010002691	pseudogene	Chr12:52482789-52483673 (-)
SPRET/EiJ	ENSMSPG00010011503	pseudogene	Chr12:54049509-54050298 (-)
WSB/EiJ	ENSIUOG00005001025	pseudogene	Chr12:52277500-52278290 (-)

Homology

• Gene Tree
  Gm48268
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000111978 (Evidence)
• NCBI Gene
  118567963

Representative Sequences			Length	Strain/Species
genomic	118567963	NCBI Gene Model | MGI Sequence Detail	468	C57BL/6J

References

• Summaries
  All 3
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;