Gm48263 Pseudogene Detail

Summary

• Symbol
  Gm48263
• Name
  predicted gene, 48263

• Feature Type
  pseudogene
• IDs
  MGI:6097683
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:59383614-59383797 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  120 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6097683	pseudogene	Chr12:59383614-59383797 (+)
129S1/SvImJ	ENSMUSG00200004569	pseudogene	Chr12:51279301-51279484 (+)
A/J	ENSMUSG00195001740	pseudogene	Chr12:53934030-53934213 (+)
AKR/J	ENSMUSG00220015930	pseudogene	Chr12:51939097-51939280 (+)
BALB/cJ	ENSMUSG00180007689	pseudogene	Chr12:52951421-52951604 (+)
C3H/HeJ	ENSMUSG00175017503	pseudogene	Chr12:55993482-55993665 (+)
C57BL/6NJ	ENSMUSG00215009753	pseudogene	Chr12:52253461-52253644 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005012402	pseudogene	Chr12:52303140-52303323 (+)
CBA/J	ENSMUSG00210014176	pseudogene	Chr12:52459214-52459397 (+)
DBA/2J	ENSMUSG00185001311	pseudogene	Chr12:54404462-54404645 (+)
FVB/NJ	ENSMUSG00205005637	pseudogene	Chr12:52237601-52237784 (+)
JF1/MsJ	ENSUMUG00000008647	pseudogene	Chr12:58420984-58421167 (+)
LP/J	ENSMUSG00230011629	pseudogene	Chr12:61401246-61401429 (+)
NOD/ShiLtJ	ENSMUSG00190007170	pseudogene	Chr12:51430037-51430220 (+)
NZO/HlLtJ	ENSMUSG00225029658	pseudogene	Chr12:63548590-63548773 (+)
PWK/PhJ	ENSLUMG00010002697	pseudogene	Chr12:52465687-52465870 (+)
SPRET/EiJ	ENSMSPG00010011511	pseudogene	Chr12:54019954-54020137 (+)
WSB/EiJ	ENSIUOG00005001028	pseudogene	Chr12:52260444-52260627 (+)

Homology

• Gene Tree
  Gm48263
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000112867 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000112867	Ensembl Gene Model | MGI Sequence Detail	184	C57BL/6J
transcript	ENSMUST00000219756	Ensembl | MGI Sequence Detail	184	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;