Gm48214 Pseudogene Detail

Summary

• Symbol
  Gm48214
• Name
  predicted gene, 48214

• Feature Type
  pseudogene
• IDs
  MGI:6097610
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:106178632-106178989 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  159 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6097610	pseudogene	Chr13:106178632-106178989 (+)
129S1/SvImJ	ENSMUSG00200009240	pseudogene	Chr13:100599610-100599967 (+)
A/J	ENSMUSG00195013815	pseudogene	Chr13:101190702-101191072 (+)
AKR/J	ENSMUSG00220027476	pseudogene	Chr13:99617434-99617804 (+)
BALB/cJ	ENSMUSG00180031502	pseudogene	Chr13:101763329-101763686 (+)
C3H/HeJ	ENSMUSG00175028159	pseudogene	Chr13:101828802-101829159 (+)
C57BL/6NJ	ENSMUSG00215022848	pseudogene	Chr13:101826272-101826629 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005011562	pseudogene	Chr13:100973354-100973724 (+)
CBA/J	ENSMUSG00210010652	pseudogene	Chr13:101149787-101150144 (+)
DBA/2J	ENSMUSG00185027559	pseudogene	Chr13:104919187-104919544 (+)
FVB/NJ	ENSMUSG00205007776	pseudogene	Chr13:100611376-100611733 (+)
JF1/MsJ	ENSUMUG00000014704	pseudogene	Chr13:104467974-104468344 (+)
LP/J	ENSMUSG00230008428	pseudogene	Chr13:115069260-115069617 (+)
NOD/ShiLtJ	ENSMUSG00190019663	pseudogene	Chr13:101498503-101498873 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010026310	pseudogene	Chr13:100503482-100503852 (+)
SPRET/EiJ	ENSMSPG00010017789	pseudogene	Chr13:102046754-102047124 (+)
WSB/EiJ	ENSIUOG00005009903	pseudogene	Chr13:100598441-100598811 (+)

Homology

• Gene Tree
  Gm48214
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00000114899 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000114899	Ensembl Gene Model | MGI Sequence Detail	358	C57BL/6J
transcript	ENSMUST00000224697	Ensembl | MGI Sequence Detail	358	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;