Gm48202 Gene Detail

Summary

• Symbol
  Gm48202
• Name
  predicted gene, 48202

• Feature Type
  lncRNA gene
• IDs
  MGI:6097589
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:120575170-120602612 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  844 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6097589	lncRNA gene	Chr10:120575170-120602612 (-)
129S1/SvImJ	ENSMUSG00200027042	lncRNA gene	Chr10:116948142-116953357 (-)
A/J	ENSMUSG00195022531	lncRNA gene	Chr10:117359407-117364543 (-)
AKR/J	ENSMUSG00220015297	lncRNA gene	Chr10:116990617-116995835 (-)
BALB/cJ	ENSMUSG00180017613	lncRNA gene	Chr10:117371915-117377049 (-)
C3H/HeJ	ENSMUSG00175025581	lncRNA gene	Chr10:117368333-117373553 (-)
C57BL/6NJ	ENSMUSG00215017349	lncRNA gene	Chr10:117007071-117012283 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005033246	lncRNA gene	Chr10:116330946-116336133 (-)
CBA/J	ENSMUSG00210021319	lncRNA gene	Chr10:117205081-117210302 (-)
DBA/2J	ENSMUSG00185009439	lncRNA gene	Chr10:117323258-117328391 (-)
FVB/NJ	ENSMUSG00205024943	lncRNA gene	Chr10:116610079-116615218 (-)
JF1/MsJ	ENSUMUG00000028060	lncRNA gene	Chr10:118596899-118602039 (-)
LP/J	ENSMUSG00230025447	lncRNA gene	Chr10:119276320-119281533 (-)
NOD/ShiLtJ	ENSMUSG00190018444	lncRNA gene	Chr10:117416307-117421442 (-)
NZO/HlLtJ	ENSMUSG00225038308	lncRNA gene	Chr10:123525997-123531213 (-)
PWK/PhJ	ENSLUMG00010013220	lncRNA gene	Chr10:116998896-117004067 (-)
SPRET/EiJ	ENSMSPG00010017557	lncRNA gene	Chr10:118915121-118920262 (-)
WSB/EiJ	ENSIUOG00005014252	lncRNA gene	Chr10:117056454-117061541 (-)

Homology

• Gene Tree
  Gm48202
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  41

• Ensembl
  ENSMUSG00000111907 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000111907	Ensembl Gene Model | MGI Sequence Detail	27443	C57BL/6J
transcript	ENSMUST00000352579	Ensembl | MGI Sequence Detail	1477	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;