Gm48194 Gene Detail

Summary

• Symbol
  Gm48194
• Name
  predicted gene, 48194

• Feature Type
  lncRNA gene
• IDs
  MGI:6097578
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:59928876-59929392 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  86 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6097578	lncRNA gene	Chr13:59928876-59929392 (-)
129S1/SvImJ	ENSMUSG00200016950	lncRNA gene	Chr13:56832914-56833430 (-)
A/J	ENSMUSG00195044950	lncRNA gene	Chr13:56289860-56290376 (-)
AKR/J	ENSMUSG00220043652	lncRNA gene	Chr13:55830984-55831500 (-)
BALB/cJ	ENSMUSG00180017661	lncRNA gene	Chr13:56544661-56545177 (-)
C3H/HeJ	ENSMUSG00175044626	lncRNA gene	Chr13:56328536-56329052 (-)
C57BL/6NJ	ENSMUSG00215040470	lncRNA gene	Chr13:56336144-56336660 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005041131	lncRNA gene	Chr13:56725111-56725635 (-)
CBA/J	ENSMUSG00210041393	lncRNA gene	Chr13:56533383-56533899 (-)
DBA/2J	ENSMUSG00185017192	lncRNA gene	Chr13:57376448-57376964 (-)
FVB/NJ	ENSMUSG00205042840	lncRNA gene	Chr13:56146085-56146601 (-)
JF1/MsJ	ENSUMUG00000039048	lncRNA gene	Chr13:56742890-56743405 (-)
LP/J	ENSMUSG00230034861	lncRNA gene	Chr13:66733322-66733838 (-)
NOD/ShiLtJ	ENSMUSG00190037612	lncRNA gene	Chr13:56389409-56389925 (-)
NZO/HlLtJ	ENSMUSG00225035071	lncRNA gene	Chr13:60432550-60433066 (-)
PWK/PhJ	ENSLUMG00010023782	lncRNA gene	Chr13:55673534-55674049 (-)
SPRET/EiJ	ENSMSPG00010041410	lncRNA gene	Chr13:56051648-56052130 (-)
WSB/EiJ	ENSIUOG00005025566	lncRNA gene	Chr13:55857602-55858118 (-)

Homology

• Gene Tree
  Gm48194
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000114835 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000114835	Ensembl Gene Model | MGI Sequence Detail	517	C57BL/6J
transcript	ENSMUST00000226102	Ensembl | MGI Sequence Detail	517	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;