Gm48186 Pseudogene Detail

Summary

• Symbol
  Gm48186
• Name
  predicted gene, 48186

• Feature Type
  pseudogene
• IDs
  MGI:6097565
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:65801318-65801556 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  10 from dbSNP Build 142
• Strain Annotations
  27

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6097565	pseudogene	Chr13:65801318-65801556 (+)
129S1/SvImJ	ENSMUSG00200014070	pseudogene	Chr13:61741161-61741399 (-)
A/J	ENSMUSG00195031247	pseudogene	Chr13:61840897-61841135 (-)
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	ENSMUSG00215012801	pseudogene	Chr13:62144955-62145193 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005014937	pseudogene	Chr13:10318609-10318835 (-)
CBA/J	no annotation
DBA/2J	ENSMUSG00185010619	pseudogene	Chr13:64712021-64712259 (-)
DBA/2J	ENSMUSG00185010752	pseudogene	Chr13:65611952-65612190 (-)
DBA/2J	ENSMUSG00185010637	pseudogene	Chr13:64816637-64816875 (+)
DBA/2J	ENSMUSG00185010272	pseudogene	Chr13:63089593-63089831 (-)
DBA/2J	ENSMUSG00185009380	pseudogene	Chr13:64370007-64370245 (-)
DBA/2J	ENSMUSG00185010493	pseudogene	Chr13:64449098-64449336 (+)
DBA/2J	ENSMUSG00185010584	pseudogene	Chr13:64674902-64675140 (-)
DBA/2J	ENSMUSG00185010671	pseudogene	Chr13:65160249-65289829 (-)
FVB/NJ	no annotation
JF1/MsJ	ENSUMUG00000032984	pseudogene	Chr13:62872143-62872381 (+)
LP/J	ENSMUSG00230035754	pseudogene	Chr13:73923340-73923578 (-)
LP/J	ENSMUSG00230035470	pseudogene	Chr13:72753215-72753453 (-)
LP/J	ENSMUSG00230035615	pseudogene	Chr13:73279365-73279603 (+)
LP/J	ENSMUSG00230035775	pseudogene	Chr13:73960461-73960699 (-)
LP/J	ENSMUSG00230035080	pseudogene	Chr13:73641720-73641958 (-)
LP/J	ENSMUSG00230036033	pseudogene	Chr13:75761857-75762095 (-)
LP/J	ENSMUSG00230035965	pseudogene	Chr13:75471464-75471702 (-)
LP/J	ENSMUSG00230036659	pseudogene	Chr13:74408735-74527187 (-)
LP/J	ENSMUSG00230035831	pseudogene	Chr13:74234198-74234436 (+)
LP/J	ENSMUSG00230035813	pseudogene	Chr13:74065098-74065336 (+)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010011859	pseudogene	Chr13:61500388-61500625 (-)
SPRET/EiJ	ENSMSPG00010034305	pseudogene	Chr13:62169113-62169351 (+)
WSB/EiJ	ENSIUOG00005024674	pseudogene	Chr13:60622219-60622457 (-)

Homology

• Gene Tree
  Gm48186
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  29

• Ensembl
  ENSMUSG00000113461 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000113461	Ensembl Gene Model | MGI Sequence Detail	239	C57BL/6J
transcript	ENSMUST00000221726	Ensembl | MGI Sequence Detail	239	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;