Gm48128 Pseudogene Detail

Summary

• Symbol
  Gm48128
• Name
  predicted gene, 48128

• Feature Type
  pseudogene
• IDs
  MGI:6097487
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:49702366-49706211 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  36 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6097487	pseudogene	Chr10:49702366-49706211 (+)
129S1/SvImJ	ENSMUSG00200008055	pseudogene	Chr10:46594796-46597807 (+)
A/J	ENSMUSG00195003077	pseudogene	Chr10:46872584-46875589 (+)
AKR/J	ENSMUSG00220006314	pseudogene	Chr10:46557264-46558352 (+)
BALB/cJ	ENSMUSG00180012142	pseudogene	Chr10:47002306-47005321 (+)
C3H/HeJ	ENSMUSG00175010491	pseudogene	Chr10:46743705-46746710 (+)
C57BL/6NJ	ENSMUSG00215002234	pseudogene	Chr10:46499242-46502253 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005008807	pseudogene	Chr10:46745858-46747527 (+)
CBA/J	ENSMUSG00210008398	pseudogene	Chr10:46646836-46649841 (+)
DBA/2J	ENSMUSG00185003267	pseudogene	Chr10:46803023-46806034 (+)
FVB/NJ	ENSMUSG00205005384	pseudogene	Chr10:46701705-46704711 (+)
JF1/MsJ	ENSUMUG00000029514	pseudogene	Chr10:46507779-46509444 (+)
LP/J	ENSMUSG00230006769	pseudogene	Chr10:48604699-48607704 (+)
NOD/ShiLtJ	ENSMUSG00190005555	pseudogene	Chr10:46957723-46960728 (+)
NZO/HlLtJ	ENSMUSG00225023074	pseudogene	Chr10:52885623-52888634 (+)
PWK/PhJ	ENSLUMG00010005058	pseudogene	Chr10:46631002-46632662 (+)
SPRET/EiJ	ENSMSPG00010013481	pseudogene	Chr10:47778634-47782026 (+)
WSB/EiJ	ENSIUOG00005015143	pseudogene	Chr10:46568422-46571426 (+)

Homology

• Gene Tree
  Gm48128
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000111551 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000111551	Ensembl Gene Model | MGI Sequence Detail	3846	C57BL/6J
transcript	ENSMUST00000215393	Ensembl | MGI Sequence Detail	3846	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;