Gm48126 Pseudogene Detail

Summary

• Symbol
  Gm48126
• Name
  predicted gene, 48126

• Feature Type
  pseudogene
• IDs
  MGI:6097484
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:93754952-93772132 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  772 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6097484	pseudogene	Chr10:93754952-93772132 (+)
129S1/SvImJ	ENSMUSG00200030051	pseudogene	Chr10:90248753-90265550 (+)
A/J	ENSMUSG00195022166	pseudogene	Chr10:90686711-90703498 (+)
AKR/J	ENSMUSG00220022752	pseudogene	Chr10:90254201-90271102 (+)
BALB/cJ	ENSMUSG00180033597	pseudogene	Chr10:90689391-90706181 (+)
C3H/HeJ	ENSMUSG00175023794	pseudogene	Chr10:90590205-90606996 (+)
C57BL/6NJ	ENSMUSG00215029089	pseudogene	Chr10:90285334-90302520 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005036829	pseudogene	Chr10:89979763-89996910 (+)
CBA/J	ENSMUSG00210036349	pseudogene	Chr10:90425301-90442095 (+)
DBA/2J	ENSMUSG00185043581	pseudogene	Chr10:90637276-90654062 (+)
FVB/NJ	ENSMUSG00205020148	pseudogene	Chr10:90335541-90352342 (+)
JF1/MsJ	ENSUMUG00000027538	pseudogene	Chr10:92055925-92073073 (+)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190019786	pseudogene	Chr10:90674583-90691371 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010024623	pseudogene	Chr10:90325543-90342710 (+)
SPRET/EiJ	ENSMSPG00010010678	pseudogene	Chr10:91942513-91959839 (+)
WSB/EiJ	ENSIUOG00005040123	pseudogene	Chr10:90369767-90386656 (+)

Homology

• Gene Tree
  Gm48126
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  18

• Ensembl
  ENSMUSG00000114757 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000114757	Ensembl Gene Model | MGI Sequence Detail	17181	C57BL/6J
transcript	ENSMUST00000225546	Ensembl | MGI Sequence Detail	522	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;