Gm48111 Pseudogene Detail

Summary

• Symbol
  Gm48111
• Name
  predicted gene, 48111

• Feature Type
  pseudogene
• IDs
  MGI:6097464
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:65552110-65555950 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• Strain Annotations
  91

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6097464	pseudogene	Chr13:65552110-65555950 (+)
129S1/SvImJ	ENSMUSG00200013906	pseudogene	Chr13:61590768-61593636 (+)
A/J	ENSMUSG00195007837	pseudogene	Chr1:108499421-108503261 (-)
AKR/J	ENSMUSG00220040722	pseudogene	Chr13:60836000-60838966 (+)
BALB/cJ	ENSMUSG00180001230	pseudogene	Chr1:22570731-22574569 (-)
BALB/cJ	ENSMUSG00180016919	pseudogene	Chr12:86709538-86713378 (+)
BALB/cJ	ENSMUSG00180006734	pseudogene	Chr5:51725505-51729345 (+)
BALB/cJ	ENSMUSG00180045378	pseudogene	ChrX:88741180-88745020 (+)
BALB/cJ	ENSMUSG00180032122	pseudogene	ChrX:8775853-8779693 (+)
BALB/cJ	ENSMUSG00180006453	pseudogene	Chr12:44542231-44546071 (+)
BALB/cJ	ENSMUSG00180021042	pseudogene	Chr1:189671641-189675481 (-)
BALB/cJ	ENSMUSG00180014727	pseudogene	Chr8:58220489-58224329 (-)
BALB/cJ	ENSMUSG00180045421	pseudogene	Chr3:97378104-97381944 (-)
BALB/cJ	ENSMUSG00180004881	pseudogene	Chr4:5987743-5991583 (-)
BALB/cJ	ENSMUSG00180042395	pseudogene	ChrX:125728040-125731880 (-)
C3H/HeJ	ENSMUSG00175000549	pseudogene	Chr1:107298164-107302004 (-)
C57BL/6NJ	ENSMUSG00215054059	pseudogene	Chr2:82011260-82015100 (-)
C57BL/6NJ	ENSMUSG00215015768	pseudogene	Chr1:14231956-14235796 (-)
C57BL/6NJ	ENSMUSG00215007739	pseudogene	Chr12:13293785-13297625 (-)
C57BL/6NJ	ENSMUSG00215019124	pseudogene	Chr13:61550330-61554170 (-)
C57BL/6NJ	ENSMUSG00215020097	pseudogene	Chr17:76974859-76978699 (-)
C57BL/6NJ	ENSMUSG00215042171	pseudogene	ChrX:9438913-9442753 (+)
C57BL/6NJ	ENSMUSG00215051572	pseudogene	Chr12:104836119-104839959 (-)
C57BL/6NJ	ENSMUSG00215020322	pseudogene	Chr13:61535168-61539008 (+)
C57BL/6NJ	ENSMUSG00215002927	pseudogene	Chr5:56222793-56226633 (-)
C57BL/6NJ	ENSMUSG00215047404	pseudogene	Chr7:36582218-36586057 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005002486	pseudogene	Chr14:80485993-80489833 (+)
CAST/EiJ	ENSTCUG00005030649	pseudogene	Chr10:53766150-53769990 (-)
CAST/EiJ	ENSTCUG00005027249	pseudogene	Chr4:8463444-8467284 (-)
CAST/EiJ	ENSTCUG00005030663	pseudogene	Chr10:53780840-53784680 (+)
CAST/EiJ	ENSTCUG00005034264	pseudogene	Chr5:63946046-63949885 (+)
CAST/EiJ	ENSTCUG00005022135	pseudogene	Chr1:10111542-10115382 (-)
CAST/EiJ	ENSTCUG00005014736	pseudogene	Chr16:55643159-55646999 (-)
CAST/EiJ	ENSTCUG00005034006	pseudogene	Chr16:34351996-34355836 (-)
CAST/EiJ	ENSTCUG00005012806	pseudogene	Chr16:65550358-65554198 (+)
CAST/EiJ	ENSTCUG00005002481	pseudogene	Chr14:72704971-72708811 (-)
CAST/EiJ	ENSTCUG00005053413	pseudogene	Chr7:94965203-94969043 (+)
CBA/J	ENSMUSG00210003058	pseudogene	Chr1:19547084-19550924 (-)
CBA/J	ENSMUSG00210003353	pseudogene	Chr1:60946623-60950463 (-)
CBA/J	ENSMUSG00210005885	pseudogene	Chr5:12307975-12311815 (-)
CBA/J	ENSMUSG00210018467	pseudogene	Chr15:37777674-37781514 (+)
CBA/J	ENSMUSG00210028687	pseudogene	Chr7:28962898-28966738 (-)
CBA/J	ENSMUSG00210005473	pseudogene	Chr6:143858612-143862452 (-)
CBA/J	ENSMUSG00210025725	pseudogene	ChrX:63769938-63773778 (-)
CBA/J	ENSMUSG00210025872	pseudogene	ChrX:62082285-62085852 (+)
CBA/J	ENSMUSG00210013833	pseudogene	Chr12:8166720-8170560 (-)
CBA/J	ENSMUSG00210000298	pseudogene	Chr1:107195438-107199278 (-)
DBA/2J	ENSMUSG00185005353	pseudogene	Chr1:62063528-62067368 (-)
DBA/2J	ENSMUSG00185039109	pseudogene	ChrX:73800817-73804657 (+)
DBA/2J	ENSMUSG00185040952	pseudogene	Chr2:17508705-17512545 (+)
DBA/2J	ENSMUSG00185019347	pseudogene	Chr6:103005045-103008885 (+)
DBA/2J	ENSMUSG00185036673	pseudogene	Chr15:38770291-38774131 (+)
DBA/2J	ENSMUSG00185031508	pseudogene	ChrX:123639138-123642978 (-)
DBA/2J	ENSMUSG00185036630	pseudogene	Chr15:31938146-31941986 (-)
DBA/2J	ENSMUSG00185029380	pseudogene	Chr7:41582255-41586094 (+)
FVB/NJ	ENSMUSG00205035170	pseudogene	Chr3:95787002-95790842 (-)
FVB/NJ	ENSMUSG00205024538	pseudogene	Chr14:70036782-70040622 (-)
FVB/NJ	ENSMUSG00205020107	pseudogene	ChrX:65460875-65464715 (-)
FVB/NJ	ENSMUSG00205051823	pseudogene	Chr3:89248480-89252320 (-)
FVB/NJ	ENSMUSG00205036075	pseudogene	Chr15:31831043-31834883 (-)
FVB/NJ	ENSMUSG00205001662	pseudogene	Chr12:35487947-35491787 (-)
FVB/NJ	ENSMUSG00205014900	pseudogene	Chr18:70016655-70020495 (+)
FVB/NJ	ENSMUSG00205011356	pseudogene	Chr15:61989969-61993808 (-)
JF1/MsJ	ENSUMUG00000034810	pseudogene	Chr13:62622586-62626426 (+)
LP/J	ENSMUSG00230011365	pseudogene	Chr5:58223086-58226926 (-)
LP/J	ENSMUSG00230027105	pseudogene	Chr5:22544099-22547939 (+)
LP/J	ENSMUSG00230000685	pseudogene	Chr1:23382596-23386434 (-)
LP/J	ENSMUSG00230009861	pseudogene	Chr5:65977585-65981425 (-)
LP/J	ENSMUSG00230008582	pseudogene	Chr8:2323043-2326604 (-)
LP/J	ENSMUSG00230017160	pseudogene	Chr14:18991347-18995186 (-)
LP/J	ENSMUSG00230009852	pseudogene	Chr5:62937035-62940875 (-)
LP/J	ENSMUSG00230004189	pseudogene	Chr14:108079430-108083270 (-)
LP/J	ENSMUSG00230027308	pseudogene	ChrX:168924555-168928395 (+)
LP/J	ENSMUSG00230047741	pseudogene	Chr4:121029832-121033672 (+)
NOD/ShiLtJ	ENSMUSG00190041802	pseudogene	Chr13:61821416-61824290 (+)
NZO/HlLtJ	ENSMUSG00225010398	pseudogene	Chr5:93370188-93374028 (-)
NZO/HlLtJ	ENSMUSG00225048462	pseudogene	ChrX:86271297-86274864 (+)
NZO/HlLtJ	ENSMUSG00225001668	pseudogene	Chr1:65288575-65292415 (-)
NZO/HlLtJ	ENSMUSG00225022716	pseudogene	Chr7:4328667-4332507 (+)
NZO/HlLtJ	ENSMUSG00225020372	pseudogene	Chr8:10190498-10194059 (-)
NZO/HlLtJ	ENSMUSG00225004157	pseudogene	Chr3:121004082-121007922 (+)
NZO/HlLtJ	ENSMUSG00225031549	pseudogene	Chr16:82906216-82910056 (+)
PWK/PhJ	ENSLUMG00010013054	pseudogene	Chr13:61368461-61371339 (+)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005001571	pseudogene	Chr12:32384950-32388790 (-)
WSB/EiJ	ENSIUOG00005018936	pseudogene	Chr11:109110857-109114697 (+)
WSB/EiJ	ENSIUOG00005030285	pseudogene	Chr1:60749686-60753526 (-)
WSB/EiJ	ENSIUOG00005012610	pseudogene	Chr1:18565529-18569369 (+)
WSB/EiJ	ENSIUOG00005010097	pseudogene	Chr18:51704003-51707843 (-)
WSB/EiJ	ENSIUOG00005015069	pseudogene	Chr17:7486582-7490422 (+)
WSB/EiJ	ENSIUOG00005053218	pseudogene	Chr7:4627656-4631496 (+)
WSB/EiJ	ENSIUOG00005009722	pseudogene	Chr7:28655040-28658880 (-)

Homology

• Gene Tree
  Gm48111
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  93

• Ensembl
  ENSMUSG00000113388 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000113388	Ensembl Gene Model | MGI Sequence Detail	3841	C57BL/6J
transcript	ENSMUST00000221482	Ensembl | MGI Sequence Detail	3841	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;